Releases: kkrismer/transite
Releases · kkrismer/transite
transite 1.6.0
- Bioconductor 3.11 release
- changed function names to adhere to tidyverse style guide (breaking change)
- change method names to adhere to tidyverse style guide (breaking change)
- changed parameter names to adhere to tidyverse style guide (breaking change)
- changed internal variable names to adhere to tidyverse style guide
- fixed issue with mixed cached and uncached sequences
- added unit tests
- fixed issue with uninitialized IUPAC table
- removed unused C++ functions
- gracefully stop cluster after parLapply
- added transcript values overlay to spectrum plots
- fixed issue due to floating point machine precision
- improved efficiency of transcript set shuffling
- replaced Rcpp::sample() with Rcpp::RcppArmadillo::sample() to avoid memory leak
- fix roxygen annotation for package data
transite 1.4.0
v1.4.0 Adjust README.md to Bioconductor 3.10
transite 1.2.1
- update author list
transite 1.2.0
- Bioconductor 3.9 release
transite 1.1.2
- updated roxygen2
- updated license
- clarified argument description of SPMA
- fixed issue with multi-threaded cluster environment
transite 1.0.2
- updated roxygen2
- updated license
- clarified argument description of SPMA
- fixed issue with multi-threaded cluster environment
transite 1.0.1
- fixed typo in vignette
- added code example for drawVolcanoPlot function
- increased size of circles for motif-associated k-mers in drawVolcanoPlot function
transite 1.0.0
Initial release on Bioconductor 3.8 release branch
transite 0.99.4
Initial release on Bioconductor