Add tests for Scheduler job and job definition creation with input fo…

…lder, refactor execution manager test (#513) (#515)

* use fixtures, rename job used to job-4

* test scheduler job creation and job def creation with input folder

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* remove duplciate fixture

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

conftest.py

@@ -13,6 +13,8 @@
 DB_FILE_PATH = f"{HERE}/jupyter_scheduler/tests/testdb.sqlite"
 DB_URL = f"sqlite:///{DB_FILE_PATH}"
 
+TEST_ROOT_DIR = f"{HERE}/jupyter_scheduler/tests/test_root_dir"
+
 
 @pytest.fixture
 def jp_server_config(jp_server_config):
@@ -44,7 +46,7 @@ def jp_scheduler_db():
 
 
 @pytest.fixture
-def jp_scheduler(jp_data_dir):
+def jp_scheduler():
     return Scheduler(
-        db_url=DB_URL, root_dir=str(jp_data_dir), environments_manager=MockEnvironmentManager()
+        db_url=DB_URL, root_dir=str(TEST_ROOT_DIR), environments_manager=MockEnvironmentManager()
     )

jupyter_scheduler/tests/test_execution_manager.py

@@ -1,50 +1,43 @@
-import os
-from contextlib import contextmanager
 from pathlib import Path
-from unittest.mock import PropertyMock, patch
 
 import pytest
 from sqlalchemy import create_engine
 from sqlalchemy.orm import sessionmaker
 
+from conftest import DB_URL
 from jupyter_scheduler.executors import DefaultExecutionManager
-from jupyter_scheduler.orm import Base, Job
+from jupyter_scheduler.orm import Job
 
-NOTEBOOK_DIR = Path(__file__).resolve().parent / "test_staging_dir" / "job-3"
+JOB_ID = "69856f4e-ce94-45fd-8f60-3a587457fce7"
 NOTEBOOK_NAME = "side_effects.ipynb"
+SIDE_EFECT_FILE_NAME = "output_side_effect.txt"
+
+NOTEBOOK_DIR = Path(__file__).resolve().parent / "test_staging_dir" / "job-4"
 NOTEBOOK_PATH = NOTEBOOK_DIR / NOTEBOOK_NAME
-SIDE_EFFECT_FILE = NOTEBOOK_DIR / "output_side_effect.txt"
+SIDE_EFFECT_FILE = NOTEBOOK_DIR / SIDE_EFECT_FILE_NAME
 
 
-def test_execution_manager_with_side_effects():
-    db_url = "sqlite://"
-    engine = create_engine(db_url, echo=False)
-    Base.metadata.create_all(engine)
-    db_session = sessionmaker(bind=engine)
-    with db_session() as session:
+@pytest.fixture
+def load_job(jp_scheduler_db):
+    with jp_scheduler_db() as session:
         job = Job(
             runtime_environment_name="abc",
             input_filename=NOTEBOOK_NAME,
-            job_id="123",
+            job_id=JOB_ID,
         )
         session.add(job)
         session.commit()
 
-        manager = DefaultExecutionManager(
-            job_id="123",
-            root_dir=str(NOTEBOOK_DIR),
-            db_url=db_url,
-            staging_paths={"input": str(NOTEBOOK_PATH)},
-        )
 
-        with patch.object(
-            DefaultExecutionManager,
-            "db_session",
-            new_callable=PropertyMock,
-        ) as mock_db_session:
-            mock_db_session.return_value = db_session
-            manager.add_side_effects_files(str(NOTEBOOK_DIR))
-
-            assert (
-                "output_side_effect.txt" in job.packaged_files
-            ), "Side effect file was not added to packaged_files"
+def test_add_side_effects_files(jp_scheduler_db, load_job):
+    manager = DefaultExecutionManager(
+        job_id=JOB_ID,
+        root_dir=str(NOTEBOOK_DIR),
+        db_url=DB_URL,
+        staging_paths={"input": str(NOTEBOOK_PATH)},
+    )
+    manager.add_side_effects_files(str(NOTEBOOK_DIR))
+
+    with jp_scheduler_db() as session:
+        job = session.query(Job).filter(Job.job_id == JOB_ID).one()
+        assert SIDE_EFECT_FILE_NAME in job.packaged_files

jupyter_scheduler/tests/test_root_dir/job-5/a/b/helloworld.txt

@@ -0,0 +1 @@
+Hello world!

jupyter_scheduler/tests/test_root_dir/job-5/import-helloworld.ipynb

@@ -0,0 +1,40 @@
+{
+ "cells": [
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "dbbca65f-4b6a-4490-94b6-f7cdd87e7023",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "file_path = 'a/b/helloworld.txt'\n",
+    "\n",
+    "with open(file_path, 'r') as file:\n",
+    "    content = file.read()\n",
+    "\n",
+    "print(content)"
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3 (ipykernel)",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.11.9"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 5
+}

jupyter_scheduler/tests/test_scheduler.py

@@ -6,13 +6,14 @@
 import pytest
 
 from jupyter_scheduler.models import (
+    CreateJob,
     CreateJobDefinition,
     ListJobDefinitionsQuery,
     SortDirection,
     SortField,
     UpdateJobDefinition,
 )
-from jupyter_scheduler.orm import JobDefinition
+from jupyter_scheduler.orm import Job, JobDefinition
 
 
 def test_create_job_definition(jp_scheduler):
@@ -39,6 +40,49 @@ def test_create_job_definition(jp_scheduler):
         assert "hello world" == definition.name
 
 
+def test_create_job_definition_with_input_folder(jp_scheduler):
+    job_definition_id = jp_scheduler.create_job_definition(
+        CreateJobDefinition(
+            input_uri="job-5/import-helloworld.ipynb",
+            runtime_environment_name="default",
+            name="import hello world",
+            output_formats=["ipynb"],
+            package_input_folder=True,
+        )
+    )
+
+    with jp_scheduler.db_session() as session:
+        definitions = session.query(JobDefinition).all()
+        assert 1 == len(definitions)
+        definition = definitions[0]
+        assert job_definition_id
+        assert job_definition_id == definition.job_definition_id
+        assert "import hello world" == definition.name
+        assert "a/b/helloworld.txt" in definition.packaged_files
+
+
+def test_create_job_with_input_folder(jp_scheduler):
+    job_id = jp_scheduler.create_job(
+        CreateJob(
+            input_uri="job-5/import-helloworld.ipynb",
+            runtime_environment_name="default",
+            name="import hello world",
+            output_formats=["ipynb"],
+            package_input_folder=True,
+        )
+    )
+
+    with jp_scheduler.db_session() as session:
+        jobs = session.query(Job).all()
+        assert 1 == len(jobs)
+        job = jobs[0]
+        assert job_id
+        assert job_id == job.job_id
+        assert "import hello world" == job.name
+        assert "default" == job.runtime_environment_name
+        assert "a/b/helloworld.txt" in job.packaged_files
+
+
 job_definition_1 = {
     "job_definition_id": "f4f8c8a9-f539-429a-b69e-b567f578646e",
     "name": "hello world 1",