CI: use mambaforge, uninstall pocl before doc build #7397
Workflow file for this run
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| name: CI | |
| on: | |
| pull_request: | |
| push: | |
| branches: main | |
| schedule: | |
| - cron: '5 0 * * *' | |
| jobs: | |
| # flake8: | |
| # name: Flake8 | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # - | |
| # uses: actions/setup-python@v4 | |
| # with: | |
| # # matches compat target in setup.py | |
| # python-version: '3.8' | |
| # - name: Flake8 test | |
| # run: | | |
| # python3 -m venv myenv | |
| # source myenv/bin/activate | |
| # python -m pip install wheel | |
| # python -m pip install flake8 pep8-naming flake8-quotes flake8-bugbear | |
| # python -m flake8 --show-source --statistics "$(basename $GITHUB_REPOSITORY)" test examples setup.py doc/conf.py bin/ && echo "Flake8 found no errors." | |
| # mypy: | |
| # name: Mypy | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # - | |
| # uses: actions/setup-python@v4 | |
| # with: | |
| # python-version: '3.x' | |
| # - name: Install | |
| # run: | | |
| # . .ci-support/install.sh | |
| # - name: Run mypy | |
| # run: | | |
| # MINIFORGE_INSTALL_DIR=.miniforge3 | |
| # . "$MINIFORGE_INSTALL_DIR/bin/activate" testing | |
| # python -m pip install types-psutil types-PyYAML | |
| # ./run-mypy.sh | |
| pylint: | |
| name: Pylint | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.x' | |
| - name: Install | |
| run: | | |
| . .ci-support/install.sh | |
| - name: Run Pylint | |
| run: | | |
| MINIFORGE_INSTALL_DIR=.miniforge3 | |
| . "$MINIFORGE_INSTALL_DIR/bin/activate" testing | |
| ./run-pylint.sh | |
| # pydocstyle: | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # - | |
| # uses: actions/setup-python@v4 | |
| # with: | |
| # python-version: '3.x' | |
| # - name: Run Pydocstyle | |
| # run: | | |
| # python3 -m venv myenv | |
| # source myenv/bin/activate | |
| # python -m pip install wheel | |
| # python -m pip install pydocstyle | |
| # python -m pydocstyle "$(basename $GITHUB_REPOSITORY)" && echo "pydocstyle found no errors." | |
| # pytest: | |
| # name: Pytest | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # - name: Install | |
| # run: | | |
| # . .ci-support/install.sh | |
| # - name: Run tests | |
| # run: | | |
| # MINIFORGE_INSTALL_DIR=.miniforge3 | |
| # . "$MINIFORGE_INSTALL_DIR/bin/activate" testing | |
| # cd test | |
| # python -m pip install pytest | |
| # python -m pytest --cov=mirgecom --durations=0 --tb=native --junitxml=pytest.xml --doctest-modules -rxsw . ../doc/*.rst ../doc/*/*.rst | |
| # examples: | |
| # name: Examples | |
| # runs-on: ${{ matrix.os }} | |
| # strategy: | |
| # matrix: | |
| # os: [ubuntu-latest, porter] | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # - name: Install | |
| # run: | | |
| # . .ci-support/install.sh | |
| # - name: Test lazy accuracy | |
| # run: | | |
| # MINIFORGE_INSTALL_DIR=.miniforge3 | |
| # . "$MINIFORGE_INSTALL_DIR/bin/activate" testing | |
| # conda install vtk # needed for the accuracy comparison | |
| # export XDG_CACHE_HOME=/tmp | |
| # [[ $(hostname) == "porter" ]] && export PYOPENCL_TEST="port:nv" && unset XDG_CACHE_HOME && conda install pocl-cuda | |
| # # && export POCL_DEBUG=cuda | |
| # scripts/run-integrated-tests.sh --lazy-accuracy | |
| # - name: Run examples | |
| # run: | | |
| # MINIFORGE_INSTALL_DIR=.miniforge3 | |
| # . "$MINIFORGE_INSTALL_DIR/bin/activate" testing | |
| # export XDG_CACHE_HOME=/tmp | |
| # [[ $(hostname) == "porter" ]] && export PYOPENCL_TEST="port:nv" && unset XDG_CACHE_HOME && conda install pocl-cuda | |
| # # && export POCL_DEBUG=cuda | |
| # scripts/run-integrated-tests.sh --examples | |
| doc: | |
| name: Documentation | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install | |
| run: | | |
| . .ci-support/install.sh | |
| - name: Build docs | |
| run: | | |
| MINIFORGE_INSTALL_DIR=.miniforge3 | |
| . "$MINIFORGE_INSTALL_DIR/bin/activate" testing | |
| sudo apt-get update | |
| sudo apt-get install texlive-latex-extra latexmk | |
| conda install sphinx graphviz 'docutils>=0.16' | |
| pip install sphinx-math-dollar sphinx-copybutton furo | |
| cd doc | |
| make html SPHINXOPTS="-W --keep-going -n" | |
| make latexpdf SPHINXOPTS="-W --keep-going -n" | |
| # emirge: | |
| # name: Emirge installation | |
| # runs-on: ${{ matrix.os }} | |
| # strategy: | |
| # matrix: | |
| # os: [ubuntu-latest, macos-latest] | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # - name: Install emirge | |
| # run: | | |
| # [[ $(uname) == Linux ]] && sudo apt-get update && sudo apt-get install -y openmpi-bin libopenmpi-dev | |
| # [[ $(uname) == Darwin ]] && brew upgrade && brew install mpich | |
| # cd .. | |
| # git clone https://github.com/illinois-ceesd/emirge | |
| # cd emirge | |
| # cp -a ../mirgecom . | |
| # ./install.sh --skip-clone | |
| # - name: Run simple mirgecom test | |
| # run: | | |
| # cd .. | |
| # source emirge/config/activate_env.sh | |
| # cd mirgecom/examples | |
| # python -m mpi4py ./pulse-mpi.py | |
| # y1: | |
| # name: Production testing | |
| # runs-on: ${{ matrix.os }} | |
| # strategy: | |
| # matrix: | |
| # os: [ubuntu-latest, macos-latest, porter] | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # with: | |
| # fetch-depth: '0' | |
| # - name: Prepare production environment | |
| # run: | | |
| # [[ $(uname) == Linux ]] && [[ $(hostname) != "porter" ]] && sudo apt-get update && sudo apt-get install -y openmpi-bin libopenmpi-dev | |
| # [[ $(uname) == Darwin ]] && brew upgrade && brew install mpich | |
| # MIRGEDIR=$(pwd) | |
| # cat scripts/production-testing-env.sh | |
| # . scripts/production-testing-env.sh | |
| # cd .. | |
| # date | |
| # printf "Removing stale install ..." | |
| # rm -rf emirge.prod emirge.y1 | |
| # printf "done.\n" | |
| # date | |
| # git clone https://github.com/illinois-ceesd/emirge emirge.prod | |
| # cd emirge.prod | |
| # . ../mirgecom/scripts/install-mirge-from-source.sh ${MIRGEDIR}/.. | |
| # - name: Run production test | |
| # run: | | |
| # source ../config/activate_env.sh | |
| # scripts/run-integrated-tests.sh --production |