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Revert to ontobio 2.9.2 to get snapshots through #2359

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merged 1 commit into from
Aug 28, 2024

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dustine32
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This reverts ontobio from 2.9.7 to 2.9.2 for the short-term purpose of getting snapshot runs to successfully finish before we are able to fix biolink/ontobio#689. This is the "last good" ontobio installed on the Aug 11 snapshot run.

Note: this reversion shouldn't require any pipeline/Makefile reversion since the new GPAD/GPI args are compatible with both ontobio versions.

Some slack chat left me uncertain whether we should prioritize merging this to get snapshots out or we should be attacking the aforementioned biolink/ontobio#689. @sierra-moxon feel free to merge this if it looks like we're stuck on biolink/ontobio#689 for a while. P.S. I'll also be out tomorrow thru into next week.

@kltm
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kltm commented Aug 28, 2024

Cheers! Lets' give this a shake!

@kltm kltm merged commit e9c1d43 into master Aug 28, 2024
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Current version of ontobio, in some cases, has trouble parsing GAF(?)
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