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Update gorules_test_errors.gaf
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pgaudet authored Jun 29, 2023
1 parent 81b65e1 commit b187efd
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions docs/gorules_test_errors.gaf
Original file line number Diff line number Diff line change
Expand Up @@ -27,8 +27,6 @@ PomBase SPAC25B8.17 ypf1 is_active_in GO:0005634 GO_REF:0000024 ISO SGD:S0000015
PomBase SPAC25B8.17 ypf1 is_active_in GO:0005634 GO_REF:0000024 ISO SGD:S000001583 C intramembrane aspartyl protease of the perinuclear ER membrane Ypf1 (predicted) ppp81 protein taxon:4896 TODAY PomBase part_of(X:1)
! FAILS GORULE:0000002 - has a 'NOT' annotations to 'protein binding ; GO:0005515
UniProtKB O76187 darA NOT|enables GO:0048365 PMID:9802899 IPI UniProtKB:P34149 F Darlin darA DDB_G0288771 protein taxon:44689 20100205 UniProt
! FAILS GORULE:0000003 - missing Column 8 data ('with' field) for 'binding ; GO:0005488' and 'protein binding ; GO:0005515'
UniProtKB O76187 darA enables GO:0005515 PMID:9802899 IPI UniProtKB:Q23862 F protein taxon:44689 20230513 IntAct
! TBC FAILS GORULE:0000003 - incorrect evidence codes for 'binding ; GO:0005488' and 'protein binding ; GO:0005515'
UniProtKB O76187 darA enables GO:0005515 PMID:9802899 IDA UniProtKB:P34149 F Darlin darA DDB_G0288771 protein taxon:44689 20100205 UniProt
! TBC FAILS GORULE:0000005 - incorrect evidence codes for 'protein binding ; GO:0005515' - ISS not allowed
Expand Down Expand Up @@ -67,6 +65,8 @@ UniProtKB Q9HC96 CAPN10 involved_in GO:0006921 GO_REF:0000036 IC P Calpain-10 C
UniProtKB Q9HC96 CAPN10 involved_in GO:0006921 GO_REF:0000036 IDA GO:0004198|GO:0008092 P Calpain-10 CAPN10,KIAA1845 protein taxon:9606 20140213 BHF-UCL
! FAILS GORULE:0000018 - column 8 (with/from) is null
UniProtKB A0A0K3AV08 mlk-1 enables GO:0005080 PMID:23072806 IPI F Mitogen-activated protein kinase kinase kinase mlk-1 mlk-1,K11D12.10 protein taxon:6239 20170322 UniProt
! FAILS GORULE:0000018 - missing Column 8 data ('with' field) for 'binding ; GO:0005488' and 'protein binding ; GO:0005515'
UniProtKB O76187 darA GO:0005488 PMID:9802899 IPI UniProtKB:Q23862 F protein taxon:44689 20230513 IntAct
! FAILS GORULE:0000020 - obsolete term with no replacement
UniProtKB P04995 sbcB involved_in GO:0090503 GO_REF:0000108 IEA GO:0000175 P Exodeoxyribonuclease I sbcB|cpeA|xonA|JW1993|b2011 protein taxon:83333 20230509 GOC
! FAILS GORULE:0000020 - obsolete term with a replacement term
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