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Add Maker annotation workflow #47

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wants to merge 25 commits into from
Closed

Add Maker annotation workflow #47

wants to merge 25 commits into from

Commits on Jul 11, 2021

  1. Add maker annotation workflow

    @gallardoalba
    gallardoalba committed Jul 11, 2021
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  2. Update workflow name in yml file

    @gallardoalba
    gallardoalba committed Jul 11, 2021
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  3. Update title and dockstore file

    @gallardoalba
    gallardoalba committed Jul 11, 2021
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  4. Modify dockstore file

    @gallardoalba
    gallardoalba committed Jul 11, 2021
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  5. Fix tests

    @gallardoalba
    gallardoalba committed Jul 11, 2021
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  6. Fix tests

    @gallardoalba
    gallardoalba committed Jul 11, 2021
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Commits on Jul 13, 2021

  1. Update datasets

    @gallardoalba
    gallardoalba committed Jul 13, 2021
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  2. Use planemo from master branch for tests

    @mvdbeek
    mvdbeek committed Jul 13, 2021
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Commits on Jul 14, 2021

  1. Include tar in augustus conda package

    @gallardoalba
    gallardoalba committed Jul 14, 2021
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Commits on Jul 18, 2021

  1. Update workflow Augustus 3.4

    @gallardoalba
    gallardoalba committed Jul 18, 2021
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Commits on Jul 20, 2021

  1. Update tests include files

    @gallardoalba
    gallardoalba committed Jul 20, 2021
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  2. Remove unnecesary file

    @gallardoalba
    gallardoalba committed Jul 20, 2021
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  3. Fix tests replace size by value

    @gallardoalba
    gallardoalba committed Jul 20, 2021
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Commits on Jul 22, 2021

  1. Update tests

    @gallardoalba
    gallardoalba committed Jul 22, 2021
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Commits on Jul 23, 2021

  1. Revert "Use planemo from master branch for tests" 

    This reverts commit 97acc4a.
I've release 0.74.6 with the necessary fixes.
    @mvdbeek
    mvdbeek committed Jul 23, 2021
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  2. Move maker-annotation-eukaryote into genome-annotation 

    - Use only asserts for summary.txt files
- Rename dockstore workflow name to "main"
- Add release field in workflow
    @mvdbeek
    mvdbeek committed Jul 23, 2021
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  3. Also drop remaining exact comparisons

    @mvdbeek
    mvdbeek committed Jul 23, 2021
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  4. More test fixes

    @mvdbeek
    mvdbeek committed Jul 23, 2021
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  5. Update last tests

    @gallardoalba
    gallardoalba committed Jul 23, 2021
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Commits on Sep 6, 2021

  1. Update README.md 

    Information about the workflow evaluation.
    @gallardoalba
    gallardoalba authored Sep 6, 2021
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Commits on Sep 20, 2021

  1. Update CHANGELOG.md

    @gallardoalba
    gallardoalba authored Sep 20, 2021
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  2. Update workflows/genome-annotation/maker-annotation-eukaryote/README.md 

    Co-authored-by: Marius van den Beek <[email protected]>
    @gallardoalba @mvdbeek
    gallardoalba and mvdbeek authored Sep 20, 2021
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Commits on Oct 7, 2021

  1. Update README.md: include licencing

    @gallardoalba
    gallardoalba authored Oct 7, 2021
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  2. Update CHANGELOG.md

    @gallardoalba
    gallardoalba authored Oct 7, 2021
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Commits on Apr 11, 2022

  1. Update workflows/genome-annotation/maker-annotation-eukaryote/README.md 

    Co-authored-by: Anthony Bretaudeau <[email protected]>
    @gallardoalba @abretaud
    gallardoalba and abretaud authored Apr 11, 2022
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