Chore/refactor wes models

[SalihuDickson]

Summary by Sourcery

Refactor TES and WES converters to utilize Pydantic models for improved validation and conversion. Enhance the CLI and CI workflow for better consistency and coverage. Introduce unit tests for WRROC models and validators, and add a Lefthook configuration for pre-push linting automation.

Enhancements:

• Refactor TES and WES converters to use Pydantic models for data validation and conversion, improving code readability and error handling.
• Update the CLI to use double quotes for consistency and improve readability.
• Add a new utility function to convert datetime objects to RFC 3339 format.
• Refactor the CI workflow to use the latest versions of GitHub Actions and ensure tests are run on all branches.

CI:

• Modify the CI workflow to run on all branches instead of just the main branch, and update the GitHub Actions versions to the latest.

Tests:

• Add unit tests for WRROC models and validators to ensure data validation and conversion processes are functioning correctly.

Chores:

• Add a Lefthook configuration file to automate pre-push checks using Ruff for linting.

[sourcery-ai]

Reviewer's Guide by Sourcery

This pull request refactors the WES and TES models, introduces new WRROC models, and updates the converters and validators accordingly. It also includes improvements to the CI workflow and adds a pre-push hook for linting.

File-Level Changes

Change	Details	Files
Refactored and expanded TES and WES models	Created new TES models with detailed attributes and validations Created new WES models with detailed attributes and validations Added type hints and docstrings to model classes	crategen/models/tes_models.py crategen/models/wes_models.py
Introduced new WRROC models	Created base WRROC model and specific models for TES and WES conversions Added WRROC Process, Workflow, and Provenance models Implemented Pydantic models with field validations	crategen/models/wrroc_models.py
Updated TES and WES converters	Refactored convert_to_wrroc and convert_from_wrroc methods Implemented stricter type checking and error handling Updated converters to use new model classes	crategen/converters/tes_converter.py crategen/converters/wes_converter.py
Added new validators for WRROC data	Implemented validate_wrroc function to determine WRROC profile Created specific validators for TES and WES conversions Added URL validation for WES conversion	crategen/validators.py
Updated CI workflow	Updated Python and action versions Added test running step Improved conditional execution of steps	.github/workflows/ci.yml
Added pre-push hook for linting	Configured Lefthook to run Ruff linter before push Set up linting only for changed Python files	lefthook.yml
Minor updates to utility functions and CLI	Added convert_to_rfc3339_format function Updated imports and formatting in CLI file	crategen/utils.py crategen/cli.py
Added unit tests for WRROC models	Implemented tests for WRROCProcess, WRROCWorkflow, and WRROCProvenance models Added tests for WRROC validators	tests/unit/test_wrroc_models.py

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