Merge pull request #206 from davidycliao/dependabot/pip/matplotlib-3.9.2 #496
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| # name: R-ubuntu | |
| # | |
| # on: | |
| # push: | |
| # branches: | |
| # - main | |
| # pull_request: | |
| # branches: | |
| # - main | |
| # | |
| # jobs: | |
| # R-CMD-check: | |
| # runs-on: ubuntu-20.04 | |
| # | |
| # strategy: | |
| # matrix: | |
| # r-version: ['4.3.2', '4.2.0', '4.2.1'] | |
| # | |
| # steps: | |
| # - uses: actions/checkout@v3 | |
| # | |
| # - name: Cache R dependencies | |
| # uses: actions/cache@v2 | |
| # with: | |
| # path: ~/R/x86_64-pc-linux-gnu-library/ | |
| # key: ${{ runner.os }}-r-${{ hashFiles('**/renv.lock') }} | |
| # restore-keys: ${{ runner.os }}-r- | |
| # | |
| # - name: Setup R | |
| # uses: r-lib/actions/setup-r@v2 | |
| # with: | |
| # use-public-rspm: true | |
| # | |
| # - name: Restore R environment | |
| # run: | | |
| # Rscript -e "if (!requireNamespace('renv', quietly = TRUE)) install.packages('renv')" | |
| # Rscript -e "renv::restore()" | |
| # | |
| # - name: Install additional R packages | |
| # run: Rscript -e 'install.packages(c("knitr", "rmarkdown", "lsa", "purrr", "ggplot2"))' | |
| # shell: bash | |
| # | |
| # - name: Set up Python | |
| # uses: actions/setup-python@v2 | |
| # with: | |
| # python-version: '3.10.x' | |
| # | |
| # - name: Install Python virtualenv | |
| # run: pip install virtualenv | |
| # | |
| # - name: Create Python virtual environment | |
| # run: virtualenv flair_env | |
| # | |
| # - name: Install Python dependencies in virtual environment | |
| # run: | | |
| # source flair_env/bin/activate | |
| # pip install --upgrade pip | |
| # pip install scipy==1.12.0 # test | |
| # pip install flair | |
| # | |
| # - name: Remove Python cache files | |
| # run: find . -name '*.pyc' -delete | |
| # | |
| # - name: Check R environment status | |
| # run: Rscript -e "renv::status()" | |
| # | |
| # - name: Synchronize R environment | |
| # run: Rscript -e "renv::sync()" | |
| # | |
| # - name: Check R package (with virtual environment) | |
| # run: | | |
| # source flair_env/bin/activate | |
| # R CMD build . --no-build-vignettes | |
| # R CMD check *tar.gz --no-build-vignettes --no-manual --no-examples | |
| # shell: bash | |
| # | |
| # | |
| name: R-ubuntu | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| r-version: ['4.3.2', '4.2.0', '4.2.1'] | |
| env: | |
| R_LIBS_USER: /home/runner/work/_temp/Library | |
| TZ: UTC | |
| _R_CHECK_SYSTEM_CLOCK_: FALSE | |
| NOT_CRAN: true | |
| RSPM: https://packagemanager.posit.co/cran/__linux__/focal/latest | |
| RENV_CONFIG_REPOS_OVERRIDE: https://packagemanager.posit.co/cran/__linux__/focal/latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Cache R dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/R/x86_64-pc-linux-gnu-library/ | |
| key: ${{ runner.os }}-r-${{ matrix.r-version }}-${{ hashFiles('**/renv.lock') }} | |
| restore-keys: ${{ runner.os }}-r-${{ matrix.r-version }}- | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| r-version: ${{ matrix.r-version }} | |
| - name: Restore R environment | |
| run: | | |
| if (!requireNamespace('renv', quietly = TRUE)) install.packages('renv') | |
| renv::restore() | |
| shell: Rscript {0} | |
| - name: Install additional R packages | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} # Use the default GitHub token for authentication | |
| run: | | |
| install.packages(c("knitr", "rmarkdown", "lsa", "purrr", "ggplot2")) | |
| install.packages('remotes') | |
| remotes::install_github("davidycliao/flaiR", auth_token = Sys.getenv("GITHUB_TOKEN"), force = TRUE) | |
| shell: Rscript {0} | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.10.x' | |
| - name: Install Python virtualenv | |
| run: pip install virtualenv | |
| - name: Create Python virtual environment | |
| run: virtualenv flair_env | |
| - name: Install Python dependencies in virtual environment | |
| run: | | |
| source flair_env/bin/activate | |
| pip install --upgrade pip | |
| pip install scipy==1.12.0 | |
| pip install flair | |
| pip install gensim | |
| - name: Remove Python cache files | |
| run: find . -name '*.pyc' -delete | |
| - name: Check R environment status | |
| run: renv::status() | |
| shell: Rscript {0} | |
| # - name: Check R package (with virtual environment) | |
| # run: | | |
| # source flair_env/bin/activate | |
| # R CMD build . --no-build-vignettes | |
| # R CMD check *tar.gz --no-build-vignettes --no-manual --no-tests --no-examples | |
| # shell: bash |