bedhost

bedhost is a Python FastAPI module for the API that powers BEDbase. It needs a path to the bedbase configuration file, which can be provided either via -c/--config argument or read from $BEDBASE_CONFIG environment variable.

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Links of interest

• Deployed public instance: https://bedbase.org/
• Documentation: https://docs.bedbase.org/bedhost
• API: https://api.bedbase.org/
• DEV API: https://api-dev.bedbase.org/
• UI: https://bedbase.org/ -DEV UI: https://dev.bedhost.pages.dev/
• Source Code: https://github.com/databio/bedhost/

Developer quick-start

source environment/production.env
BEDBASE_CONFIG=deployment/config/api.bedbase.org.yaml uvicorn bedhost.main:app --reload

UI development:

export VITE_API_HOST=http://localhost:8000