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update notebooks
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@chrishavlin
chrishavlin committed Jul 7, 2023
1 parent 7b0ea09 commit a0ba7c5
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96 changes: 48 additions & 48 deletions docs/examples/ytnapari_scene_01_intro.ipynb
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Expand Up @@ -41,11 +41,11 @@
"name": "stderr",
"output_type": "stream",
"text": [
"yt : [INFO ] 2022-03-08 19:25:04,825 Parameters: current_time = 0.0060000200028298\n",
"yt : [INFO ] 2022-03-08 19:25:04,826 Parameters: domain_dimensions = [32 32 32]\n",
"yt : [INFO ] 2022-03-08 19:25:04,828 Parameters: domain_left_edge = [0. 0. 0.]\n",
"yt : [INFO ] 2022-03-08 19:25:04,829 Parameters: domain_right_edge = [1. 1. 1.]\n",
"yt : [INFO ] 2022-03-08 19:25:04,830 Parameters: cosmological_simulation = 0\n"
"yt : [INFO ] 2023-07-07 12:10:53,595 Parameters: current_time = 0.0060000200028298\n",
"yt : [INFO ] 2023-07-07 12:10:53,596 Parameters: domain_dimensions = [32 32 32]\n",
"yt : [INFO ] 2023-07-07 12:10:53,597 Parameters: domain_left_edge = [0. 0. 0.]\n",
"yt : [INFO ] 2023-07-07 12:10:53,604 Parameters: domain_right_edge = [1. 1. 1.]\n",
"yt : [INFO ] 2023-07-07 12:10:53,605 Parameters: cosmological_simulation = 0\n"
]
}
],
Expand Down Expand Up @@ -77,7 +77,7 @@
"id": "7759684f-8854-4fad-adfb-8004ebf3d01b",
"metadata": {},
"source": [
"The new `yt_scene` object will have a method, `add_to_viewer` that will uniformly sample the dataset and add the new sample to the viewer:"
"The new `yt_scene` object will have a method, `add_region` that will uniformly sample the dataset within a rectalinear region and add the new sample to the viewer:"
]
},
{
Expand All @@ -90,8 +90,8 @@
"name": "stderr",
"output_type": "stream",
"text": [
"Parsing Hierarchy : 100%|███████████████████| 173/173 [00:00<00:00, 4132.70it/s]\n",
"yt : [INFO ] 2022-03-08 19:25:04,966 Gathering a field list (this may take a moment.)\n"
"Parsing Hierarchy : 100%|██████████████████████████████████████████████████| 173/173 [00:00<00:00, 9528.50it/s]\n",
"yt : [INFO ] 2023-07-07 12:11:31,861 Gathering a field list (this may take a moment.)\n"
]
}
],
Expand All @@ -100,19 +100,19 @@
"right_edge = ds.domain_center + ds.arr([40, 40, 40], 'kpc')\n",
"res = (600, 600, 600)\n",
"\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Temperature\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge,\n",
" resolution= res)\n",
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Temperature\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge,\n",
" resolution= res)\n",
"\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge,\n",
" resolution = res)"
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge,\n",
" resolution = res)"
]
},
{
Expand Down Expand Up @@ -151,19 +151,19 @@
},
{
"cell_type": "code",
"execution_count": 7,
"execution_count": 6,
"id": "83009ffe-7675-4431-bf8e-5c13c4fc7d29",
"metadata": {},
"outputs": [],
"source": [
"left_edge = ds.domain_center - ds.arr([20, 20, 20], 'kpc')\n",
"right_edge = ds.domain_center + ds.arr([10, 10, 10], 'kpc')\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"TotalEnergy\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge,\n",
" resolution=(200, 200, 200))"
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"TotalEnergy\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge,\n",
" resolution=(200, 200, 200))"
]
},
{
Expand Down Expand Up @@ -202,7 +202,7 @@
},
{
"cell_type": "code",
"execution_count": 10,
"execution_count": 7,
"id": "c3302d60-eec4-484c-a1fc-9d534351720b",
"metadata": {},
"outputs": [],
Expand All @@ -212,36 +212,36 @@
},
{
"cell_type": "code",
"execution_count": 12,
"execution_count": 8,
"id": "c584f4ab-c6c8-4d8d-93b5-8799cd14f8a8",
"metadata": {},
"outputs": [],
"source": [
"left_edge = ds.domain_center - ds.arr([10, 10, 10], 'kpc')\n",
"right_edge = ds.domain_center + ds.arr([10, 10, 10], 'kpc')\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(600, 600, 600),\n",
" colormap=\"magma\",\n",
" contrast_limits=(3.4, 6.4))\n",
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(600, 600, 600),\n",
" colormap=\"magma\",\n",
" contrast_limits=(3.4, 6.4))\n",
"\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Temperature\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"yellow\",\n",
" contrast_limits=(4., 6.),\n",
" opacity=0.6)"
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Temperature\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"yellow\",\n",
" contrast_limits=(4., 6.),\n",
" opacity=0.6)"
]
},
{
"cell_type": "code",
"execution_count": 13,
"execution_count": 9,
"id": "b2f04137-fcfa-4504-a0f5-345ed3b6ec14",
"metadata": {},
"outputs": [],
Expand Down Expand Up @@ -292,7 +292,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.9.0"
"version": "3.9.16"
}
},
"nbformat": 4,
Expand Down
122 changes: 61 additions & 61 deletions docs/examples/ytnapari_scene_02_linking_layers.ipynb
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Expand Up @@ -43,11 +43,11 @@
"name": "stderr",
"output_type": "stream",
"text": [
"yt : [INFO ] 2022-03-09 11:51:28,389 Parameters: current_time = 0.0060000200028298\n",
"yt : [INFO ] 2022-03-09 11:51:28,391 Parameters: domain_dimensions = [32 32 32]\n",
"yt : [INFO ] 2022-03-09 11:51:28,393 Parameters: domain_left_edge = [0. 0. 0.]\n",
"yt : [INFO ] 2022-03-09 11:51:28,394 Parameters: domain_right_edge = [1. 1. 1.]\n",
"yt : [INFO ] 2022-03-09 11:51:28,396 Parameters: cosmological_simulation = 0\n"
"yt : [INFO ] 2023-07-07 12:13:53,426 Parameters: current_time = 0.0060000200028298\n",
"yt : [INFO ] 2023-07-07 12:13:53,427 Parameters: domain_dimensions = [32 32 32]\n",
"yt : [INFO ] 2023-07-07 12:13:53,427 Parameters: domain_left_edge = [0. 0. 0.]\n",
"yt : [INFO ] 2023-07-07 12:13:53,429 Parameters: domain_right_edge = [1. 1. 1.]\n",
"yt : [INFO ] 2023-07-07 12:13:53,429 Parameters: cosmological_simulation = 0\n"
]
}
],
Expand Down Expand Up @@ -76,44 +76,44 @@
"name": "stderr",
"output_type": "stream",
"text": [
"Parsing Hierarchy : 100%|███████████████████| 173/173 [00:00<00:00, 5008.31it/s]\n",
"yt : [INFO ] 2022-03-09 11:51:28,521 Gathering a field list (this may take a moment.)\n"
"Parsing Hierarchy : 100%|█████████████████████████████████████████████████| 173/173 [00:00<00:00, 11704.97it/s]\n",
"yt : [INFO ] 2023-07-07 12:13:55,001 Gathering a field list (this may take a moment.)\n"
]
}
],
"source": [
"left_edge = ds.domain_center - ds.arr([10, 10, 10], 'kpc')\n",
"right_edge = ds.domain_center + ds.arr([10, 10, 10], 'kpc')\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(600, 600, 600),\n",
" colormap=\"magma\",\n",
" name=\"Density_1\")\n",
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(600, 600, 600),\n",
" colormap=\"magma\",\n",
" name=\"Density_1\")\n",
"\n",
"left_edge = ds.domain_center + ds.arr([10, 10, 10], 'kpc')\n",
"right_edge = left_edge + ds.arr([20, 20, 20], 'kpc')\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"magma\",\n",
" name=\"Density_2\")\n",
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"magma\",\n",
" name=\"Density_2\")\n",
"\n",
"left_edge = ds.domain_center + ds.arr([-10, -10, 10], 'kpc')\n",
"right_edge = left_edge + ds.arr([20, 20, 20], 'kpc')\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"magma\",\n",
" name=\"Density_3\")"
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"magma\",\n",
" name=\"Density_3\")"
]
},
{
Expand Down Expand Up @@ -302,38 +302,38 @@
"\n",
"left_edge = ds.domain_center - ds.arr([10, 10, 10], 'kpc')\n",
"right_edge = ds.domain_center + ds.arr([10, 10, 10], 'kpc')\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(600, 600, 600),\n",
" colormap=\"magma\",\n",
" name=\"Density_1\")\n",
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(600, 600, 600),\n",
" colormap=\"magma\",\n",
" name=\"Density_1\")\n",
"\n",
"left_edge = ds.domain_center + ds.arr([10, 10, 10], 'kpc')\n",
"right_edge = left_edge + ds.arr([20, 20, 20], 'kpc')\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"magma\",\n",
" name=\"Density_2\",\n",
" link_to=\"Density_1\")\n",
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"magma\",\n",
" name=\"Density_2\",\n",
" link_to=\"Density_1\")\n",
"\n",
"left_edge = ds.domain_center + ds.arr([-10, -10, 10], 'kpc')\n",
"right_edge = left_edge + ds.arr([20, 20, 20], 'kpc')\n",
"yt_scene.add_to_viewer(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"magma\",\n",
" name=\"Density_3\",\n",
" link_to=\"Density_1\")"
"yt_scene.add_region(viewer,\n",
" ds,\n",
" (\"enzo\", \"Density\"),\n",
" left_edge = left_edge,\n",
" right_edge = right_edge, \n",
" resolution=(300, 300, 300),\n",
" colormap=\"magma\",\n",
" name=\"Density_3\",\n",
" link_to=\"Density_1\")"
]
},
{
Expand Down Expand Up @@ -419,7 +419,7 @@
},
{
"cell_type": "code",
"execution_count": 18,
"execution_count": 14,
"id": "2257679a-40d9-48fb-9129-781a8807f4d9",
"metadata": {},
"outputs": [],
Expand All @@ -437,7 +437,7 @@
},
{
"cell_type": "code",
"execution_count": 14,
"execution_count": 15,
"id": "a4cabcb5-a568-413b-b3e9-52ca172ee299",
"metadata": {},
"outputs": [
Expand All @@ -447,7 +447,7 @@
"(1.7102702133721501, 6.447333768718712)"
]
},
"execution_count": 14,
"execution_count": 15,
"metadata": {},
"output_type": "execute_result"
}
Expand Down Expand Up @@ -481,7 +481,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.9.0"
"version": "3.9.16"
}
},
"nbformat": 4,
Expand Down

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