refactor: Also skip fastx with skip preprocess

dalmolingroup · Mar 24, 2024 · 5cec0de · 5cec0de
1 parent d349665
commit 5cec0de
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflows/euryale.nf b/workflows/euryale.nf
@@ -132,7 +132,7 @@ workflow EURYALE {
         ch_versions = ch_versions.mix(ASSEMBLY.out.versions)
     }
 
-    if (!params.assembly_based) {
+    if (!params.assembly_based && !params.skip_preprocess) {
         GUNZIP (
             clean_reads
         )