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D3b/COV-IRT RNAseq SNV Calling Workflow (beta)

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@migbro migbro released this 24 Jun 13:31
· 3 commits to master since this release
0.4
663b5a4
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Learn about vigilant mode.
  • Sorting steps removed and duplicates marked directly
  • Added explicit bam index input for strelka2 for better index naming style compatibility
  • Added very basic VEP r100 annotation tool
  • This release was used on cavatica to create "Analysis-ready variants"
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