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change lemaitre3 to lemaitre4
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marcobarilari authored Jun 24, 2024
1 parent d062da4 commit 712a2ee
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2 changes: 1 addition & 1 deletion doc/cpp_fmriprep.slurm
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#
# writtent by CPP people
#
# Submission command for Lemaitre3
# Submission command for Lemaitre4
#
# sbatch cpp_fmriprep.slurm <subjID> <TaskName>
#
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2 changes: 1 addition & 1 deletion doc/cpp_mriqc.slurm
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#
# writtent by CPP people
#
# Submission command for Lemaitre3
# Submission command for Lemaitre4
#
# sbatch cpp_mriqc.slurm <subjID>
#
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2 changes: 1 addition & 1 deletion doc/cpp_mriqc_group.slurm
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#
# writtent by CPP people
#
# Submission command for Lemaitre3 after running mriqc for each participant
# Submission command for Lemaitre4 after running mriqc for each participant
#
# sbatch cpp_mriqc_group.slurm

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2 changes: 1 addition & 1 deletion doc/install_datalad.md
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To contribute see [here](https://cpp-lln-lab.github.io/CPP_HPC/contributing/)

- First of all access one the clusters (this has been tried on _Lemaitre3_)
- First of all access one the clusters (this has been tried on _Lemaitre4_)
- Upgrade `pip`.

```bash
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6 changes: 5 additions & 1 deletion doc/overview.md
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Expand Up @@ -71,7 +71,11 @@ to choose the cluster that best meets your necessities)

ThrFor example two clusters with different characteristics (part of the CECI cluster):

##### Lemaitre3
##### Lemaitre3

!!! Warning

SHUTDOWN FORM JULY 1ST 2024 AND REPLACED BY LEMAITRE4 !!!!!

- Louvain-la-Neuve
- Nodes 96 GB RAM
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4 changes: 2 additions & 2 deletions doc/run_fmriprep.md
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datald update --merge
``````

Depending on the cluster “unlock” is needed or not. No need for `lemaitre3`.
Depending on the cluster “unlock” is needed or not. No need for `lemaitre3`. !!! TO CHECK ON LEMAITRE4

```bash
datalad unlock containers/images/bids/bids-fmriprep--21.0.1.sing
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On the cluster prompt, submit the jobs as:
```bash
# Submission command for Lemaitre3
# Submission command for Lemaitre4
# USAGE on cluster:
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6 changes: 3 additions & 3 deletions doc/run_mriqc.md
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Expand Up @@ -43,7 +43,7 @@ cd path/to/containers
datald update --merge
``````

Depending on the cluster “unlock” is needed or not. No need for `lemaitre3`.
Depending on the cluster “unlock” is needed or not. No need for `lemaitre3`. !! TO CHECK ON LEMAITRE4

```bash
datalad unlock containers/images/bids/bids-mriqc--23.1.0.sing
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On the cluster prompt, submit the jobs as:
```bash
# Submission command for Lemaitre3
# Submission command for Lemaitre4
# USAGE on cluster:
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On the cluster prompt, submit the jobs as:

```bash
# Submission command for Lemaitre3
# Submission command for Lemaitre4
# USAGE on cluster:
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