The project provides some code sharing by members of Precision Medicine Genetics Lab.
The directory ./python list some useful python code.
pvalue_adjust_FDR.py, adjust the pvalue by Benjamini & Hochberg FDR.
Convert IMPUT2 (.gen/.sample) format to PLINK (.map/.ped) format (low performance).
An example of ExecutorService usage in java.
An example of calling shell in java.
Calculate the coverage and depth at whole genome exons by samtools.
Convert IMPUT2 (.gen/.sample) format to PLINK (.map/.ped) format (high performance).