Code style cleanup #334

jo-mueller · 2023-10-13T11:58:57Z

Description

This adds the __all__ keyword to all __init__ files. This makes it possible to import functions like this:

from napari_stress import *

Furthermore: does some more major code style cleanup

Type of Change

Code style

How Has This Been Tested?

Current tests apply

Checklist:

My code follows the style guidelines of this project
I have performed a self-review of my own code
New and existing unit tests pass locally with my changes

for more information, see https://pre-commit.ci

…napari-stress into add-__all__-to-inits

codecov · 2023-10-13T12:08:49Z

Codecov Report

Merging #334 (d858555) into main (403b7f2) will increase coverage by 1.85%.
The diff coverage is 71.07%.

@@            Coverage Diff             @@
##             main     #334      +/-   ##
==========================================
+ Coverage   83.69%   85.54%   +1.85%     
==========================================
  Files          52       51       -1     
  Lines        9427     9238     -189     
==========================================
+ Hits         7890     7903      +13     
+ Misses       1537     1335     -202

Files	Coverage Δ
src/napari_stress/__init__.py	`100.00% <100.00%> (ø)`
src/napari_stress/_approximation/__init__.py	`100.00% <100.00%> (ø)`
src/napari_stress/_approximation/fit_ellipsoid.py	`100.00% <100.00%> (ø)`
src/napari_stress/_measurements/__init__.py	`100.00% <100.00%> (ø)`
src/napari_stress/_measurements/curvature.py	`100.00% <100.00%> (ø)`
src/napari_stress/_measurements/measurements.py	`100.00% <ø> (ø)`
...apari_stress/_measurements/temporal_correlation.py	`100.00% <100.00%> (ø)`
src/napari_stress/_measurements/toolbox.py	`95.33% <100.00%> (-0.05%)`	⬇️
src/napari_stress/_plotting/__init__.py	`100.00% <100.00%> (ø)`
src/napari_stress/_plotting/create_plots.py	`95.78% <ø> (-0.05%)`	⬇️
... and 27 more

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…napari-stress into add-__all__-to-inits

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…napari-stress into add-__all__-to-inits

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…napari-stress into add-__all__-to-inits

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…napari-stress into add-__all__-to-inits

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…napari-stress into add-__all__-to-inits

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…napari-stress into add-__all__-to-inits

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…napari-stress into add-__all__-to-inits

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fixed tests fixed tests fixed tests

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jo-mueller and others added 5 commits October 13, 2023 13:57

added public functions to __all__

5e94757

[pre-commit.ci] auto fixes from pre-commit.com hooks

440b409

for more information, see https://pre-commit.ci

removed deprecated code

cf0ffc7

Merge branch 'add-__all__-to-inits' of https://github.com/jo-mueller/…

b42af78

…napari-stress into add-__all__-to-inits

removed main from test

c24d548

jo-mueller and others added 24 commits October 13, 2023 14:08

removed out-of-place comments

011052e

[pre-commit.ci] auto fixes from pre-commit.com hooks

7ce0dfe

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changed ambiguous variable name

37de1a6

used string napari type imports

b322145

Merge branch 'add-__all__-to-inits' of https://github.com/jo-mueller/…

72c989f

…napari-stress into add-__all__-to-inits

[pre-commit.ci] auto fixes from pre-commit.com hooks

fada4b8

for more information, see https://pre-commit.ci

rempoved unused import

aa068b4

shorter variable names

4845c3a

Merge branch 'add-__all__-to-inits' of https://github.com/jo-mueller/…

c2d433d

…napari-stress into add-__all__-to-inits

added LayerDataTuple alias to allowed conversions

927e441

removed unused imports

c5b7bda

codestyle

1cd595c

fixed code styles

db4fb94

[pre-commit.ci] auto fixes from pre-commit.com hooks

5b449f3

for more information, see https://pre-commit.ci

updated changed function name

9224a25

Merge branch 'add-__all__-to-inits' of https://github.com/jo-mueller/…

b844910

…napari-stress into add-__all__-to-inits

fixed imports and removed unused function

79f0ab6

fixed comparisons to True

1389bd9

removed unused variables

f1e3bc3

line breaks

520bf60

fixed euler number usage

3ca8580

[pre-commit.ci] auto fixes from pre-commit.com hooks

5e195ab

for more information, see https://pre-commit.ci

fixed ambiguous imports

6652f4e

Merge branch 'add-__all__-to-inits' of https://github.com/jo-mueller/…

50a2b8d

…napari-stress into add-__all__-to-inits

jo-mueller and others added 23 commits October 19, 2023 10:12

fixed codestyle

1ded416

Merge branch 'add-__all__-to-inits' of https://github.com/jo-mueller/…

42a6ab9

…napari-stress into add-__all__-to-inits

[pre-commit.ci] auto fixes from pre-commit.com hooks

46bf464

for more information, see https://pre-commit.ci

added missing import

2870d48

fixed function arguments

ae3fb1e

Merge branch 'add-__all__-to-inits' of https://github.com/jo-mueller/…

9564a46

…napari-stress into add-__all__-to-inits

[pre-commit.ci] auto fixes from pre-commit.com hooks

a2f4bda

for more information, see https://pre-commit.ci

fixed code style in tests and elsewhere

7e898d4

[pre-commit.ci] auto fixes from pre-commit.com hooks

6080eb6

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fixed code style

3a5afbb

[pre-commit.ci] auto fixes from pre-commit.com hooks

f481a5f

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used qt compatible library in docs requirements

db26803

Merge branch 'add-__all__-to-inits' of https://github.com/jo-mueller/…

d76b023

…napari-stress into add-__all__-to-inits

added escape for napari not found error

0890762

configure ruff to ignore Undefined name napari``

58b670d

fixed line length

9e94130

fixed code style

f2327eb

[pre-commit.ci] auto fixes from pre-commit.com hooks

e792b74

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fixed import trick

3b82006

Merge branch 'add-__all__-to-inits' of https://github.com/jo-mueller/…

fe07c68

…napari-stress into add-__all__-to-inits

fixed tests

59a0063

[pre-commit.ci] auto fixes from pre-commit.com hooks

b7fd81b

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fix tests

57d44c9

fixed tests fixed tests fixed tests

jo-mueller force-pushed the add-__all__-to-inits branch from 373ee4e to 57d44c9 Compare October 19, 2023 13:11

fixed tests

6b3258c

jo-mueller changed the title ~~added public functions to __all__~~ Code style cleanup Oct 19, 2023

jo-mueller and others added 2 commits October 19, 2023 16:49

fixed tests

2c00822

[pre-commit.ci] auto fixes from pre-commit.com hooks

d858555

for more information, see https://pre-commit.ci

jo-mueller merged commit 63c3c44 into campaslab:main Oct 26, 2023
9 of 10 checks passed

jo-mueller deleted the add-__all__-to-inits branch October 26, 2023 11:02

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Code style cleanup #334

Code style cleanup #334

jo-mueller commented Oct 13, 2023 •

edited

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codecov bot commented Oct 13, 2023 •

edited

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Code style cleanup #334

Code style cleanup #334

Conversation

jo-mueller commented Oct 13, 2023 • edited Loading

Description

Type of Change

How Has This Been Tested?

Checklist:

codecov bot commented Oct 13, 2023 • edited Loading

Codecov Report

jo-mueller commented Oct 13, 2023 •

edited

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codecov bot commented Oct 13, 2023 •

edited

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