Add "prevents infection" term

biopragmatics · Nov 14, 2023 · 548241d · 548241d
1 parent af58d5e
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Showing 7 changed files with 127 additions and 9 deletions.
diff --git a/docs/0000034/index.html b/docs/0000034/index.html
@@ -45,7 +45,7 @@ <h5 class="card-header">
             vaccine has gene engineering
         </h5>
         <div class="card-body">
-                <p>connects a vaccine (VO) to a gene that has been engineered</p>
+                <p>connects a vaccine (VO) to a gene that has been engineered. Most applicable to OMVs, Nanosponges, and nanolipoparticles (NLP).</p>
             <dl>
                 <dt>Local Unique Identifier</dt>
                 <dd>

diff --git a/docs/0000041/index.html b/docs/0000041/index.html
@@ -0,0 +1,74 @@
+
+
+<!DOCTYPE html>
+<html lang="en">
+<head>        <meta charset="utf-8">
+        <meta name="viewport" content="width=device-width, initial-scale=1.0">    <link
+        rel="stylesheet"
+        href="https://maxcdn.bootstrapcdn.com/bootstrap/4.0.0/css/bootstrap.min.css"
+        integrity="sha384-Gn5384xqQ1aoWXA+058RXPxPg6fy4IWvTNh0E263XmFcJlSAwiGgFAW/dAiS6JXm"
+        crossorigin="anonymous"
+    />
+    <link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/c3/0.6.12/c3.min.css"/>
+    <style>
+        h2 {
+            margin-top: 35px;
+        }
+
+        html, body {
+            height: 100%;
+        }
+
+        body {
+            display: flex;
+            flex-flow: column;
+        }
+
+        .footer {
+            margin-top: auto;
+            padding-top: 1em;
+            background-color: #f5f5f5;
+        }
+    </style>    <title>prevents infection</title></head>
+
+<body>
+<nav class="navbar navbar-expand-lg navbar-light bg-light">
+    <span class="navbar-brand">
+        Decentralized Biomedical Ontology
+    </span>
+</nav>
+
+<div class="container" style="margin-top: 50px; margin-bottom: 50px">
+<div class="card">
+        <h5 class="card-header">
+                <span class="badge badge-info">Relation</span>
+            prevents infection
+        </h5>
+        <div class="card-body">
+                <p>Sibling relationship to vo:0001011 (immunizes against disease)</p>
+            <dl>
+                <dt>Local Unique Identifier</dt>
+                <dd>
+                    <a href="https://bioregistry.io/debio:0000041">0000041</a>
+                </dd>
+
+
+
+
+            </dl>
+        </div>
+    </div></div>
+
+<footer class="footer">
+    <p class="small text-center text-muted">
+        Generated with PyOBO
+    </p>
+</footer>
+
+<script src="https://code.jquery.com/jquery-3.2.1.slim.min.js"
+        integrity="sha384-KJ3o2DKtIkvYIK3UENzmM7KCkRr/rE9/Qpg6aAZGJwFDMVNA/GpGFF93hXpG5KkN"
+        crossorigin="anonymous"></script>
+<script src="https://maxcdn.bootstrapcdn.com/bootstrap/4.0.0/js/bootstrap.min.js"
+        integrity="sha384-JZR6Spejh4U02d8jOt6vLEHfe/JQGiRRSQQxSfFWpi1MquVdAyjUar5+76PVCmYl"
+        crossorigin="anonymous"></script></body>
+</html>
diff --git a/docs/index.html b/docs/index.html
@@ -353,7 +353,7 @@ <h5 class="card-header">
                         </td>
                         <td align="right"><a href="0000034">0000034</a></td>
                         <td>vaccine has gene engineering</td>
-                        <td>connects a vaccine (VO) to a gene that has been engineered</td>
+                        <td>connects a vaccine (VO) to a gene that has been engineered. Most applicable to OMVs, Nanosponges, and nanolipoparticles (NLP).</td>
                     </tr>
                     <tr>
                         <td>
@@ -403,6 +403,14 @@ <h5 class="card-header">
                         <td>related trial</td>
                         <td>connects a related trial registered in a different registry</td>
                     </tr>
+                    <tr>
+                        <td>
+                                TypeDef
+                        </td>
+                        <td align="right"><a href="0000041">0000041</a></td>
+                        <td>prevents infection</td>
+                        <td>Sibling relationship to vo:0001011 (immunizes against disease)</td>
+                    </tr>
                 </tbody>
             </table>
         </div>

diff --git a/releases/current/debio.json b/releases/current/debio.json
@@ -10,7 +10,7 @@
         "val" : "bio2obo:debio"
       }, {
         "pred" : "http://www.geneontology.org/formats/oboInOwl#date",
-        "val" : "30:10:2023 16:36"
+        "val" : "14:11:2023 17:31"
       }, {
         "pred" : "http://www.geneontology.org/formats/oboInOwl#hasOBOFormatVersion",
         "val" : "1.2"
@@ -523,7 +523,7 @@
       "type" : "PROPERTY",
       "meta" : {
         "definition" : {
-          "val" : "connects a vaccine (VO) to a gene that has been engineered"
+          "val" : "connects a vaccine (VO) to a gene that has been engineered. Most applicable to OMVs, Nanosponges, and nanolipoparticles (NLP)."
         },
         "basicPropertyValues" : [ {
           "pred" : "http://www.geneontology.org/formats/oboInOwl#created_by",
@@ -608,6 +608,19 @@
           "val" : "orcid:0000-0003-4423-4370"
         } ]
       }
+    }, {
+      "id" : "http://purl.obolibrary.org/obo/debio_0000041",
+      "lbl" : "prevents infection",
+      "type" : "PROPERTY",
+      "meta" : {
+        "definition" : {
+          "val" : "Sibling relationship to vo:0001011 (immunizes against disease)"
+        },
+        "basicPropertyValues" : [ {
+          "pred" : "http://www.geneontology.org/formats/oboInOwl#created_by",
+          "val" : "orcid:0000-0003-4423-4370"
+        } ]
+      }
     }, {
       "id" : "http://www.geneontology.org/formats/oboInOwl#hasDbXref",
       "lbl" : "database_cross_reference",

diff --git a/releases/current/debio.obo b/releases/current/debio.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-date: 30:10:2023 16:36
+date: 14:11:2023 17:31
 auto-generated-by: bio2obo:debio
 data-version: 0.1.2-dev
 idspace: RO http://purl.obolibrary.org/obo/RO_
@@ -236,7 +236,7 @@ created_by: orcid:0000-0003-4423-4370
 [Typedef]
 id: debio:0000034
 name: vaccine has gene engineering
-def: "connects a vaccine (VO) to a gene that has been engineered"
+def: "connects a vaccine (VO) to a gene that has been engineered. Most applicable to OMVs, Nanosponges, and nanolipoparticles (NLP)."
 created_by: orcid:0000-0003-4423-4370
 
 [Typedef]
@@ -274,3 +274,9 @@ id: debio:0000040
 name: related trial
 def: "connects a related trial registered in a different registry"
 created_by: orcid:0000-0003-4423-4370
+
+[Typedef]
+id: debio:0000041
+name: prevents infection
+def: "Sibling relationship to vo:0001011 (immunizes against disease)"
+created_by: orcid:0000-0003-4423-4370
diff --git a/releases/current/debio.owl b/releases/current/debio.owl
@@ -13,7 +13,7 @@
         <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/debio/0.1.2-dev/debio.owl"/>
         <dc:title>Decentralized Biomedical Ontology</dc:title>
         <oboInOwl:auto-generated-by>bio2obo:debio</oboInOwl:auto-generated-by>
-        <oboInOwl:date>30:10:2023 16:36</oboInOwl:date>
+        <oboInOwl:date>14:11:2023 17:31</oboInOwl:date>
         <oboInOwl:hasOBOFormatVersion>1.2</oboInOwl:hasOBOFormatVersion>
     </owl:Ontology>
 
@@ -502,7 +502,7 @@
     <!-- http://purl.obolibrary.org/obo/debio_0000034 -->
 
     <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/debio_0000034">
-        <obo:IAO_0000115>connects a vaccine (VO) to a gene that has been engineered</obo:IAO_0000115>
+        <obo:IAO_0000115>connects a vaccine (VO) to a gene that has been engineered. Most applicable to OMVs, Nanosponges, and nanolipoparticles (NLP).</obo:IAO_0000115>
         <oboInOwl:created_by>orcid:0000-0003-4423-4370</oboInOwl:created_by>
         <oboInOwl:id>debio:0000034</oboInOwl:id>
         <rdfs:label>vaccine has gene engineering</rdfs:label>
@@ -576,6 +576,17 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/debio_0000041 -->
+
+    <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/debio_0000041">
+        <obo:IAO_0000115>Sibling relationship to vo:0001011 (immunizes against disease)</obo:IAO_0000115>
+        <oboInOwl:created_by>orcid:0000-0003-4423-4370</oboInOwl:created_by>
+        <oboInOwl:id>debio:0000041</oboInOwl:id>
+        <rdfs:label>prevents infection</rdfs:label>
+    </owl:ObjectProperty>
+
+
+
     <!-- http://purl.obolibrary.org/obo/ro_0002205 -->
 
     <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/ro_0002205"/>

diff --git a/src/debio/resources/typedefs.json b/src/debio/resources/typedefs.json
@@ -187,7 +187,7 @@
     "identifier": "0000034",
     "name": "vaccine has gene engineering",
     "creator": "0000-0003-4423-4370",
-    "description": "connects a vaccine (VO) to a gene that has been engineered"
+    "description": "connects a vaccine (VO) to a gene that has been engineered. Most applicable to OMVs, Nanosponges, and nanolipoparticles (NLP)."
   },
   {
     "identifier": "0000035",
@@ -224,5 +224,11 @@
     "name": "related trial",
     "creator": "0000-0003-4423-4370",
     "description": "connects a related trial registered in a different registry"
+  },
+  {
+    "identifier": "0000041",
+    "name": "prevents infection",
+    "creator": "0000-0003-4423-4370",
+    "description": "Sibling relationship to vo:0001011 (immunizes against disease)"
   }
 ]