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CCN Data Library 1.1.1

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@jaxinewolfe jaxinewolfe released this 15 Dec 21:02
· 87 commits to main since this release
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Synthesis Version 1.1.1

Version 1.1.1 Contents

This database contains tidal wetland soil carbon profiles and associated metadata. The data itself is housed in separate comma separated value (.csv) spreadsheets linked by common identifier attributes (study_id, site_id, and core_id).

Data Tables

  • CCN_methods.csv - Contains information on materials and methods broken down by study
  • CCN_sites.csv - Contains positional and descriptive information of the coring sites.
  • CCN_cores.csv - Contains positional and descriptive information on core locations.
  • CCN_depthseries.csv - Contains raw depth-series information for all cores.
  • CCN_species.csv - Contains information on the dominant plant species at coring locations.
  • CCN_impacts.csv - Contains information on the anthropogenic impacts at site or coring locations.

Metadata Tables

  • CCN_database_structure.html - Is a simplified, visual and interactive version of metadata.xml for display purposes.
  • CCN_study_citations.csv - Contains bibliographic information for publications and associated sources, which can be related to the database tables via study_id.
  • CCN_bibliography.bib - Contains bibliographic information for publications and sources associated with this database.

Version 1.1.1 Updates

Corrections and Additions to previously synthesized datasets

  1. OKeefe-Suttles et al 2021: added year of sampling to _cores.csv
  2. Updates in datasets collected from the CIFOR SWAMP project. Updates include corrected core_id values and core position data fixes.
    SWAMP Data-Soil carbon-Barreto-2017-Brazil
    SWAMP Data-Soil carbon-Boca Grande-2017-Brazil
    SWAMP Data-Soil carbon-Caetano-2017-Brazil
    SWAMP Data-Soil carbon-Furo Grande-2017-Brazil
    SWAMP Data-Soil carbon-Mangue Sul-2017-Brazil
    SWAMP Data-Soil carbon-Mauripe-2017-Brazil
    SWAMP Data-Soil carbon-Salina-2017-Brazil
    SWAMP Data-Soil carbon-Berahan kulon-2019
    SWAMP Data-Soil carbon-Timbulsloko-2019
    SWAMP Data-Soil carbon-Bhitakarnika-2013-India
    SWAMP Data-Soil carbon-Acarau Boca-2016-Brazil
    SWAMP Data-Soil carbon-Baouth-2014-Senegal
    SWAMP Data-Soil carbon-Caete-2017-Brazil
    SWAMP Data-Soil carbon-Cauassu Leste Shrimp-2016-Brazil
    SWAMP Data-Soil carbon-Cauassu Oeste Shrimp-2016-Brazil
    SWAMP Data-Soil carbon-Cumbe Leste Camaro-2016-Brazil
    SWAMP Data-Soil carbon-Cumbe norte Camarao-2016-Brazil
    SWAMP Data-Soil carbon-Diamniadio-2014-Senegal
    SWAMP Data-Soil carbon-Djirnda-2014-Senegal
    SWAMP Data-Soil carbon-Fambine-2014-Senegal
    SWAMP Data-Soil carbon-Furo de Chato-2017-Brazil
    SWAMP Data-Soil carbon-Mangizal Cauassu-2016-Brazil
    SWAMP Data-Soil carbon-Manguinho-2016-Brazil
    SWAMP Data-Soil carbon-Mounde-2014-Senegal
    SWAMP Data-Soil carbon-Porto Ceu Mangrove-2016-Brazil
    SWAMP Data-Soil carbon-Porto Ceu Shrimp-2016-Brazil
    SWAMP Data-Soil carbon-Sang-2014-Senegal
    SWAMP Data-Soil carbon-Case Shell-2014
    SWAMP Data-Soil carbon-Jardin Du Elephant-2014
    SWAMP Data-Soil carbon-Lac Simba Deux-2014
    SWAMP Data-Soil carbon-Lac Simba-2014
    SWAMP Data-Soil carbon-Lac Sounga Deux-2014
    SWAMP Data-Soil carbon-Lac Sounga-2014
    SWAMP Data-Soil carbon-Mwana Mouele South-2014
    SWAMP Data-Soil carbon-Mwana Mouele-2014
    SWAMP Data-Soil carbon-Ndougou-2014
    SWAMP Data-Soil carbon-Paga-2014
    SWAMP Data-Soil carbon-BRM10-2014
    SWAMP Data-Soil carbon-MRM8-2014
    SWAMP Data-Soil carbon-MRT7-2014
    SWAMP Data-Soil carbon-MRT9-2014
    SWAMP Data-Soil carbon-NCM1-2014
    SWAMP Data-Soil carbon-NCM4-2014
    SWAMP Data-Soil carbon-NCM5-2014
    SWAMP Data-Soil carbon-NCT2-2014
    SWAMP Data-Soil carbon-NCT3-2014
    SWAMP Data-Soil carbon-NCT6-2014
    SWAMP Data-Soil carbon-Marisma High-2017-Brazil
    SWAMP Data-Soil carbon-Marisma Low-2017-Brazil
    SWAMP Data-Soil carbon-Marisma Medium-2017-Brazil
    SWAMP Data-Soil carbon-Bunaken-2011
    SWAMP Data-Soil carbon-Cilacap-2011
    SWAMP Data-Soil carbon-Kubu Raya-2011-Indonesia
    SWAMP Data-Soil carbon-Sembilang-2011-Indonesia
    SWAMP Data-Soil carbon-Tanjung Puting-2009-Indonesia
    SWAMP Data-Soil carbon-Teminabuan-2011-Indonesia
    SWAMP Data-Soil carbon-Timika-2011-Indonesia
    SWAMP Data-Soil carbon-Ca Mau-2012-Vietnam
    SWAMP Data-Soil carbon-Arguni Bay-West Papua-2015-Indonesia
    SWAMP Data-Soil carbon-Bintuni Bay-West Papua-2018-Indonesia
    SWAMP Data-Soil carbon-Buruway-West Papua-2016-Indonesia
    SWAMP Data-Soil carbon-Etna Bay-West Papua-2017-Indonesia
    SWAMP Data-Soil carbon-Kaimana City-West Papua-2017-Indonesia
    SWAMP Data-Soil carbon-CanGio-2012-Vietnam
  3. Removal of modeled fraction carbon values in Drexler et al 2009
  4. Corrected a typo to include 5 cores that were previously dropped from the Fourqurean synthesis (Copertino unpublished study)
  5. Corrected the vegetation class for Turck 2014 (changed from seagrass to emergent)
  6. Added site-level coordinates for three studies in the Sanderman synthesis (Nsombo et al 2016, Eid and Staltout 2016 Egypt, and Eid et al 2016 Saudi Arabia). Also added associated publications for Eid and Staltout 2016 Egypt and Eid et al 2016 Saudi Arabia.
  7. Resolved a post-processing bug that prevented taxa resolution of the synthesis species table.
  8. Standardized activity units for several studies