Add jac_chunk_size keyword argument to ObjectiveFunction to reduce memory usage of forward mode Jacobian calculation
#269
Workflow file for this run
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| name: Unit tests | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - dev | |
| pull_request: | |
| branches: | |
| - master | |
| workflow_dispatch: | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| unit_tests: | |
| runs-on: ubuntu-latest | |
| env: | |
| GH_TOKEN: ${{ github.token }} | |
| strategy: | |
| matrix: | |
| combos: [{group: 1, python_version: '3.9'}, | |
| {group: 2, python_version: '3.10'}, | |
| {group: 3, python_version: '3.11'}, | |
| {group: 4, python_version: '3.12'}, | |
| {group: 5, python_version: '3.12'}, | |
| {group: 6, python_version: '3.12'}, | |
| {group: 7, python_version: '3.12'}, | |
| {group: 8, python_version: '3.12'}] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Filter changes | |
| id: changes | |
| uses: dorny/paths-filter@v3 | |
| with: | |
| filters: | | |
| has_changes: | |
| - 'desc/**' | |
| - 'tests/**' | |
| - 'requirements.txt' | |
| - 'devtools/dev-requirements.txt' | |
| - 'setup.cfg' | |
| - '.github/workflows/unit_tests.yml' | |
| - name: Check for relevant changes | |
| id: check_changes | |
| run: echo "has_changes=${{ steps.changes.outputs.has_changes }}" >> $GITHUB_ENV | |
| - name: Set up Python ${{ matrix.combos.python_version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.combos.python_version }} | |
| - name: Restore Python environment cache | |
| if: env.has_changes == 'true' | |
| id: restore-env | |
| uses: actions/cache/restore@v4 | |
| with: | |
| path: .venv-${{ matrix.combos.python_version }} | |
| key: ${{ runner.os }}-venv-${{ matrix.combos.python_version }}-${{ hashFiles('devtools/dev-requirements.txt', 'requirements.txt') }} | |
| - name: Set up virtual environment if not restored from cache | |
| if: steps.restore-env.outputs.cache-hit != 'true' && env.has_changes == 'true' | |
| run: | | |
| gh cache list | |
| python -m venv .venv-${{ matrix.combos.python_version }} | |
| source .venv-${{ matrix.combos.python_version }}/bin/activate | |
| python -m pip install --upgrade pip | |
| pip install -r devtools/dev-requirements.txt | |
| - name: Set Swap Space | |
| if: env.has_changes == 'true' | |
| uses: pierotofy/set-swap-space@master | |
| with: | |
| swap-size-gb: 10 | |
| - name: Test with pytest | |
| if: env.has_changes == 'true' | |
| run: | | |
| source .venv-${{ matrix.combos.python_version }}/bin/activate | |
| pwd | |
| lscpu | |
| python -m pytest -v -m unit \ | |
| --durations=0 \ | |
| --cov-report xml:cov.xml \ | |
| --cov-config=setup.cfg \ | |
| --cov=desc/ \ | |
| --mpl \ | |
| --mpl-results-path=mpl_results.html \ | |
| --mpl-generate-summary=html \ | |
| --splits 8 \ | |
| --group ${{ matrix.combos.group }} \ | |
| --splitting-algorithm least_duration \ | |
| --db ./prof.db | |
| - name: save coverage file and plot comparison results | |
| if: always() && env.has_changes == 'true' | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: unit_test_artifact-${{ matrix.combos.python_version }}-${{ matrix.combos.group }} | |
| path: | | |
| ./cov.xml | |
| ./mpl_results.html | |
| ./prof.db | |
| - name: Upload coverage | |
| if: env.has_changes == 'true' | |
| id : codecov | |
| uses: Wandalen/[email protected] | |
| with: | |
| action: codecov/codecov-action@v4 | |
| with: | | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| name: codecov-umbrella | |
| files: ./cov.xml | |
| fail_ci_if_error: true | |
| verbose: true | |
| attempt_limit: 10 | |
| attempt_delay: 60000 # ms, 1 min |