Fixed a bug which caused lai to run with null assembly fasta

Plant-Food-Research-Open · Feb 28, 2024 · 1321d59 · 1321d59
1 parent 8aefa66
commit 1321d59
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/workflows/assemblyqc.nf b/workflows/assemblyqc.nf
@@ -356,6 +356,7 @@ workflow ASSEMBLYQC {
                                                 | map { meta, mono -> [ meta.id, mono ] },
                                                 remainder: true
                                             )
+                                            | filter { id, fasta, mono -> fasta != null }
                                             | map { id, fasta, mono -> [ id, fasta, mono ?: [] ] }
 
     FASTA_LTRRETRIEVER_LAI(