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@Niema-Lab

Niema Lab

README.md

This GitHub Organization stores projects developed by students in the lab of Niema Moshiri. For my own projects, see my GitHub account (niemasd).

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  1. ViralWasm ViralWasm Public

    A client-side user-friendly web application suite for viral genomics.

    JavaScript 2

  2. ViralWasm-Consensus ViralWasm-Consensus Public

    A client-side WebAssembly pipeline for viral consensus sequence calling

    JavaScript 1

  3. ViralWasm-Epi ViralWasm-Epi Public

    A client-side WebAssembly pipeline for viral molecular epidemiology

    JavaScript 2

  4. TreeN93 TreeN93 Public

    JavaScript

  5. Reference-Genomes Reference-Genomes Public

    Preprocessed reference genomes for use with ViralMSA, ViralWasm, etc.

    Python 1

Repositories

Showing 10 of 14 repositories
  • ViralWasm-Epi Public

    A client-side WebAssembly pipeline for viral molecular epidemiology

    Niema-Lab/ViralWasm-Epi’s past year of commit activity
    JavaScript 2 GPL-3.0 0 1 7 Updated Oct 4, 2024
  • ViralWasm-Consensus Public

    A client-side WebAssembly pipeline for viral consensus sequence calling

    Niema-Lab/ViralWasm-Consensus’s past year of commit activity
    JavaScript 1 GPL-3.0 0 1 7 Updated Oct 4, 2024
  • ViralWasm Public

    A client-side user-friendly web application suite for viral genomics.

    Niema-Lab/ViralWasm’s past year of commit activity
    JavaScript 2 GPL-3.0 0 0 7 Updated Sep 30, 2024
  • Viral-Phylogenetics-Activity Public

    Activity about viral phylogenetics, targeting K-12 students

    Niema-Lab/Viral-Phylogenetics-Activity’s past year of commit activity
    4 GPL-3.0 2 0 0 Updated Apr 8, 2024
  • Reference-Genomes Public

    Preprocessed reference genomes for use with ViralMSA, ViralWasm, etc.

    Niema-Lab/Reference-Genomes’s past year of commit activity
    Python 0 GPL-3.0 1 1 0 Updated Feb 5, 2024
  • Virus-Database-Notes Public

    Notes about a potential virus database

    Niema-Lab/Virus-Database-Notes’s past year of commit activity
    1 GPL-3.0 0 0 0 Updated Jan 6, 2024
  • ViralWasm-Paper Public

    Files and scripts related to the ViralWasm paper

    Niema-Lab/ViralWasm-Paper’s past year of commit activity
    Jupyter Notebook 1 GPL-3.0 0 0 0 Updated Oct 13, 2023
  • ViralWasm-Files Public

    Various files related to ViralWasm

    Niema-Lab/ViralWasm-Files’s past year of commit activity
    C 0 GPL-3.0 0 0 0 Updated Oct 10, 2023
  • ENLACE-2023 Public

    Files related to the research project conducted during UCSD ENLACE 2023

    Niema-Lab/ENLACE-2023’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Aug 17, 2023
  • .github Public
    Niema-Lab/.github’s past year of commit activity
    0 0 0 0 Updated Aug 6, 2023
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People

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