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Zib-wounds #433

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merged 101 commits into from
Sep 30, 2024
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3213ce1
Branch init
Mar 3, 2022
cf3f489
Branch init
Mar 3, 2022
a346f69
Added nl-core layer
Feb 21, 2023
f8f7afe
Added nl core layer
Feb 23, 2023
875026c
Merge branch 'main' into zib-PressureUlcer
May 25, 2023
d5d28e3
Bug fixes
May 31, 2023
1e95668
Branch init
May 31, 2023
590599c
Rework pressureUlcer profiles
May 31, 2023
3980702
Bug fixes
Jun 6, 2023
98e91c7
Merge branch 'main' into zib-Wound
Jul 10, 2023
b7d683e
Branch init
Jul 10, 2023
2b1369a
Merge branch 'main' into zib-Burnwound
Jul 13, 2023
966b57a
Added known issue and deleted extension
Jul 13, 2023
96688ce
Merge branch 'main' into zib-Burnwound
Jul 13, 2023
2538794
Merge branch 'main' into zib-PressureUlcer
Jul 17, 2023
bcdd811
Merge branch 'main' into zib-PressureUlcer
Jul 19, 2023
9ffcc73
Merge branch 'main' into zib-Burnwound
Jul 19, 2023
bdcf536
Changed condition.code and condition.category
Jul 19, 2023
151d31e
Merge branch 'main' into zib-Wound
Jul 19, 2023
60fd669
Conerted to condition resource
Jul 19, 2023
6c8fe05
Added bodysite mapping
Jul 19, 2023
a0c0e98
Fixed known issues
Jul 19, 2023
9707496
Added valueSet binding
Jul 20, 2023
3e408ef
Added reverse reference
Jul 21, 2023
9638d02
Added release notes
Jul 24, 2023
03e9dd3
Added release notes
Jul 24, 2023
2d5fbf8
Added components and termology codes
Jul 25, 2023
60ef9d5
ValueSet bindings
Jul 28, 2023
4f5af9c
Merge branch 'main' into WoundCharacteristics
Sep 7, 2023
261ec4d
Added nl-core layer
Sep 7, 2023
9027815
Merge branch 'main' into zib-Burnwound
pieter-edelman-nictiz Sep 13, 2023
6b77fc6
New branch with the right name and profiles
Sep 13, 2023
99bbe11
Add the concept BurnType to the known zib concepts. It was removed in…
pieter-edelman-nictiz Sep 13, 2023
fb9893a
Add missing ValueSet binding
pieter-edelman-nictiz Sep 13, 2023
5f62376
Add missing ValueSets
pieter-edelman-nictiz Sep 13, 2023
a564eb8
Merge branch 'main' into WoundCharacteristics
Sep 15, 2023
75873fa
Merge branch 'main' into zib-wounds.WoundCharacteristics
Sep 18, 2023
d5c9680
Bug fixes
Sep 18, 2023
bf88258
Added release notes
Sep 20, 2023
961f3c0
Merge branch 'main' into zib-wounds.WoundImage
Sep 25, 2023
e2cd660
Mapping name fix
Sep 25, 2023
b239eae
Purpose update
Sep 27, 2023
f5702e6
Bug fixes
Sep 27, 2023
8a253fb
Fix defination
Sep 28, 2023
241662c
Description fix
Sep 28, 2023
2187b61
Merge branch 'main' into zib-wounds.WoundImage
Oct 19, 2023
e00cb6f
Typo fix
Oct 19, 2023
ef43c92
Merge branch 'main' into zib-wounds.WoundCharacteristics
Oct 19, 2023
4c566c5
Added pattern code
Oct 24, 2023
2be8e77
Fixing alias
Oct 24, 2023
7c1a4fe
typo fixes
Oct 24, 2023
c0aba8a
QA tooling fixes
Oct 26, 2023
3e5c50e
Move mapping of WoundImage concepts from Attachment.url to Attachment…
pieter-edelman-nictiz Nov 22, 2023
993814c
Add missing code for woundTissue component
pieter-edelman-nictiz Nov 23, 2023
73caa0b
Revert wound image code to current zib code (as there is no erratum)
pieter-edelman-nictiz Nov 23, 2023
ec983bc
Merge branch 'main' into zib-wounds
pieter-edelman-nictiz Nov 23, 2023
a7ebd25
Merge branch 'zib-Wound' into zib-wounds
pieter-edelman-nictiz Nov 23, 2023
9e6a4e1
Merge branch 'zib-PressureUlcer' into zib-wounds
pieter-edelman-nictiz Nov 23, 2023
479a623
Merge branch 'zib-BurnWound' into zib-wounds
pieter-edelman-nictiz Nov 23, 2023
685329f
Merge branch 'zib-wounds.WoundCharacteristics' into zib-wounds
pieter-edelman-nictiz Nov 23, 2023
0d577c4
Fix nl-core override in nl-core-PressureUlcer
pieter-edelman-nictiz Nov 24, 2023
40d8a69
Added valueSet binding and root concept
Ashwin-nictiz Dec 22, 2023
d6e84df
Merge branch 'main' into zib-wounds
Ashwin-nictiz Jan 24, 2024
5e36443
Resaved the nl-core profile
Ashwin-nictiz Jan 25, 2024
5732a90
Merge branch 'main' into zib-wounds
Ashwin-nictiz Jan 31, 2024
a18e8b3
Some bug fixes of the feedback
Ashwin-nictiz Mar 1, 2024
9f61670
Merge branch 'main' into zib-wounds
Ashwin-nictiz Mar 1, 2024
4d2e404
Added extent and dateoflastdressing terminology code
Ashwin-nictiz Mar 1, 2024
ca86f0c
Some text fixes
Ashwin-nictiz Mar 1, 2024
734aec9
Fixed the cor extensions
Ashwin-nictiz Mar 3, 2024
8332f6f
Description fix for woundcharacteristics
Ashwin-nictiz Mar 3, 2024
e9e3a46
Added known issue for burnWound
Ashwin-nictiz Mar 3, 2024
35a35b9
Fix the purpose concept
Ashwin-nictiz Mar 4, 2024
7314313
Bug fixes from the feedback
Ashwin-nictiz Mar 7, 2024
2b37f9a
Updated profiles, release notes and known issues
LuudSlagter Mar 7, 2024
af67a0a
Added known issue for BurnType
Ashwin-nictiz Mar 21, 2024
ccbd441
Split out observable wound properties into distinct profiles rather t…
pieter-edelman-nictiz Apr 3, 2024
46531df
Add missing ValueSet binding for AnatomicalLocation
pieter-edelman-nictiz Apr 3, 2024
97ebe55
Adopt the zib name "Burnwound" rather than the description "BurnWound"
pieter-edelman-nictiz Apr 10, 2024
cce721a
Tweak profile descriptions for "wounds" profiles
pieter-edelman-nictiz Apr 10, 2024
b1d8bdb
Expand the comments on the use of multiple profiles, and move the pri…
pieter-edelman-nictiz Apr 10, 2024
5c07c73
Further tweaks to the documentation of the relation between the diffe…
pieter-edelman-nictiz Apr 10, 2024
342cc79
Change wound and component profiles according to latest insights wrt …
pieter-edelman-nictiz Apr 23, 2024
6992bcf
Textual tweaks
pieter-edelman-nictiz Apr 23, 2024
3676833
Add missing narratives and other missing metadata
pieter-edelman-nictiz Apr 23, 2024
585c6ad
Fix nl-core overrides
pieter-edelman-nictiz Apr 23, 2024
03d9367
Fix MedicalDevice profile derivations irt wound
pieter-edelman-nictiz Apr 23, 2024
931c829
Suppress type slicing issues
pieter-edelman-nictiz Apr 23, 2024
5c4ef7c
Add wound drain profiles
pieter-edelman-nictiz May 15, 2024
8cd8b27
Add wound zibs terminology
pieter-edelman-nictiz May 15, 2024
bd7f51f
Document the Laterality bug in zib Burnwound
pieter-edelman-nictiz May 15, 2024
5e2acee
Merge branch 'main' into zib-wounds
pieter-edelman-nictiz Sep 30, 2024
5bc5386
Add missing CodeSystem resources for the wound zibs
pieter-edelman-nictiz Sep 30, 2024
d303dcf
Fixup the known issues for the wound zib profiles
pieter-edelman-nictiz Sep 30, 2024
2ab181e
Fix terminology bindings and resources for wound zibs
pieter-edelman-nictiz Sep 30, 2024
a6e4178
Suppress a known issue for the nl-core profile as well
pieter-edelman-nictiz Sep 30, 2024
a2bf08c
Add the different wound examples
pieter-edelman-nictiz Sep 30, 2024
68039ec
Suppress known tooling issues
pieter-edelman-nictiz Sep 30, 2024
0c01128
Override comment in nl-core
pieter-edelman-nictiz Sep 30, 2024
ae5a3a3
Suppress known issue
pieter-edelman-nictiz Sep 30, 2024
c4e057e
Adjust release notes
pieter-edelman-nictiz Sep 30, 2024
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49 changes: 49 additions & 0 deletions examples/nl-core-Burnwound-01-WoundCharacteristics-01.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,49 @@
<Observation xmlns="http://hl7.org/fhir">
<id value="nl-core-Burnwound-01-WoundCharacteristics-01"/>
<meta>
<profile value="http://nictiz.nl/fhir/StructureDefinition/nl-core-wounds.WoundCharacteristics"/>
</meta>
<text>
<status value="extensions"/>
<div xmlns="http://www.w3.org/1999/xhtml">
<table>
<caption>Observatie/bepaling. Subject: Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen. Status: definitief</caption>
<tbody>
<tr>
<th>Code</th>
<th>Waarde</th>
</tr>
<tr>
<td>
<span title="Wound finding (225552003 - SNOMED CT)">Wound finding</span>
</td>
<td/>
</tr>
</tbody>
</table>
</div>
</text>
<status value="final"/>
<code>
<coding>
<system value="http://snomed.info/sct"/>
<code value="225552003"/>
<display value="Wound finding"/>
</coding>
</code>
<subject>
<reference value="Patient/nl-core-Patient-01"/>
<type value="Patient"/>
<display value="Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen"/>
</subject>
<hasMember>
<reference value="Observation/nl-core-Burnwound.Extent-01"/>
<type value="Observation"/>
<display value="Extent of burn: 1 %"/>
</hasMember>
<hasMember>
<reference value="Observation/nl-core-Burnwound-01-DateOfLastDressingChange-01"/>
<type value="Observation"/>
<display value="Date of last dressing change: 2014-10-10"/>
</hasMember>
</Observation>
99 changes: 99 additions & 0 deletions examples/nl-core-Burnwound-01.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,99 @@
<Condition xmlns="http://hl7.org/fhir">
<id value="nl-core-Burnwound-01"/>
<meta>
<profile value="http://nictiz.nl/fhir/StructureDefinition/nl-core-Burnwound"/>
</meta>
<text>
<status value="extensions"/>
<div xmlns="http://www.w3.org/1999/xhtml">
<table>
<caption>Aandoening. Subject: Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen. Categorie: <span title="Burn (125666000 - SNOMED CT)">Burn</span>
</caption>
<tfoot>
<tr>
<td colspan="2">Mevrouw kreeg hete thee over zich heen, wond is ongeveer 10 bij 4 cm.</td>
</tr>
</tfoot>
<tbody>
<tr>
<th>Code</th>
<td>
<span title="thermische brandwond (105594005 - SNOMED CT)">thermische brandwond</span>
</td>
</tr>
<tr>
<th>Eerste symptomen</th>
<td>29 september 2014</td>
</tr>
<tr>
<th>Stadium</th>
<td>
<span title="oppervlakkige tweedegraads brandwond (262587005 - SNOMED CT)">oppervlakkige tweedegraads brandwond</span>
</td>
</tr>
<tr>
<th>Ondersteunend onderzoek</th>
<td>
<div>Details: Wound finding</div>
</td>
</tr>
</tbody>
</table>
</div>
</text>
<category>
<coding>
<system value="http://snomed.info/sct"/>
<code value="125666000"/>
<display value="Burn"/>
</coding>
</category>
<code>
<coding>
<system value="http://snomed.info/sct"/>
<code value="105594005"/>
<display value="thermische brandwond"/>
</coding>
</code>
<bodySite>
<extension url="http://nictiz.nl/fhir/StructureDefinition/ext-AnatomicalLocation.Laterality">
<valueCodeableConcept>
<coding>
<system value="http://snomed.info/sct"/>
<code value="51440002"/>
<display value="bilateraal"/>
</coding>
</valueCodeableConcept>
</extension>
<coding>
<system value="http://snomed.info/sct"/>
<code value="14975008"/>
<display value="onderarm"/>
</coding>
</bodySite>
<subject>
<reference value="Patient/nl-core-Patient-01"/>
<type value="Patient"/>
<display value="Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen"/>
</subject>
<onsetDateTime value="2014-09-29"/>
<stage>
<summary>
<coding>
<system value="http://snomed.info/sct"/>
<code value="262587005"/>
<display value="oppervlakkige tweedegraads brandwond"/>
</coding>
</summary>
</stage>
<evidence>
<detail>
<reference value="Observation/nl-core-Burnwound-01-WoundCharacteristics-01"/>
<type value="Observation"/>
<display value="Wound finding"/>
</detail>
</evidence>
<note>
<text value="Mevrouw kreeg hete thee over zich heen, wond is ongeveer 10 bij 4 cm."/>
</note>
</Condition>
45 changes: 45 additions & 0 deletions examples/nl-core-Burnwound.Extent-01.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,45 @@
<Observation xmlns="http://hl7.org/fhir">

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<id value="nl-core-Burnwound.Extent-01"/>
<meta>
<profile value="http://nictiz.nl/fhir/StructureDefinition/nl-core-Burnwound.Extent"/>
</meta>
<text>
<status value="extensions"/>
<div xmlns="http://www.w3.org/1999/xhtml">
<table>
<caption>Observatie/bepaling. Subject: Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen. Status: definitief</caption>
<tbody>
<tr>
<th>Code</th>
<th>Waarde</th>
</tr>
<tr>
<td>
<span title="Extent of burn (360531000146101 - SNOMED CT)">Extent of burn</span>
</td>
<td>1 %</td>
</tr>
</tbody>
</table>
</div>
</text>
<status value="final"/>
<code>
<coding>
<system value="http://snomed.info/sct"/>
<code value="360531000146101"/>
<display value="Extent of burn"/>
</coding>
</code>
<subject>
<reference value="Patient/nl-core-Patient-01"/>
<type value="Patient"/>
<display value="Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen"/>
</subject>
<valueQuantity>
<value value="1"/>
<unit value="%"/>
<system value="http://unitsofmeasure.org"/>
<code value="%"/>
</valueQuantity>
</Observation>
49 changes: 49 additions & 0 deletions examples/nl-core-PressureUlcer-01-WoundCharacteristics-01.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,49 @@
<Observation xmlns="http://hl7.org/fhir">

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Best Practice Recommendation: In general, all observations should have an effective[x] () (at Observation)
<id value="nl-core-PressureUlcer-01-WoundCharacteristics-01"/>
<meta>
<profile value="http://nictiz.nl/fhir/StructureDefinition/nl-core-wounds.WoundCharacteristics"/>
</meta>
<text>
<status value="extensions"/>
<div xmlns="http://www.w3.org/1999/xhtml">
<table>
<caption>Observatie/bepaling. Subject: Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen. Status: definitief</caption>
<tbody>
<tr>
<th>Code</th>
<th>Waarde</th>
</tr>
<tr>
<td>
<span title="Wound finding (225552003 - SNOMED CT)">Wound finding</span>
</td>
<td/>
</tr>
</tbody>
</table>
</div>
</text>
<status value="final"/>
<code>
<coding>
<system value="http://snomed.info/sct"/>
<code value="225552003"/>
<display value="Wound finding"/>
</coding>
</code>
<subject>
<reference value="Patient/nl-core-Patient-01"/>
<type value="Patient"/>
<display value="Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen"/>
</subject>
<hasMember>
<reference value="Observation/nl-core-PressureUlcer-01-WoundLength-01"/>
<type value="Observation"/>
<display value="Wound length: 3 cm"/>
</hasMember>
<hasMember>
<reference value="Observation/nl-core-PressureUlcer-01-WoundWidth-01"/>
<type value="Observation"/>
<display value="Wound width: 2 cm"/>
</hasMember>
</Observation>
45 changes: 45 additions & 0 deletions examples/nl-core-PressureUlcer-01-WoundLength-01.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,45 @@
<Observation xmlns="http://hl7.org/fhir">
<id value="nl-core-PressureUlcer-01-WoundLength-01"/>
<meta>
<profile value="http://nictiz.nl/fhir/StructureDefinition/nl-core-wounds.WoundLength"/>
</meta>
<text>
<status value="extensions"/>
<div xmlns="http://www.w3.org/1999/xhtml">
<table>
<caption>Observatie/bepaling. Subject: Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen. Status: definitief</caption>
<tbody>
<tr>
<th>Code</th>
<th>Waarde</th>
</tr>
<tr>
<td>
<span title="Length of Wound (39126-8 - LOINC)">Length of Wound</span>
</td>
<td>3 cm</td>
</tr>
</tbody>
</table>
</div>
</text>
<status value="final"/>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="39126-8"/>
<display value="Length of Wound"/>
</coding>
</code>
<subject>
<reference value="Patient/nl-core-Patient-01"/>
<type value="Patient"/>
<display value="Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen"/>
</subject>
<valueQuantity>
<value value="3"/>
<unit value="cm"/>
<system value="http://unitsofmeasure.org"/>
<code value="cm"/>
</valueQuantity>
</Observation>
45 changes: 45 additions & 0 deletions examples/nl-core-PressureUlcer-01-WoundWidth-01.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,45 @@
<Observation xmlns="http://hl7.org/fhir">
<id value="nl-core-PressureUlcer-01-WoundWidth-01"/>
<meta>
<profile value="http://nictiz.nl/fhir/StructureDefinition/nl-core-wounds.WoundWidth"/>
</meta>
<text>
<status value="extensions"/>
<div xmlns="http://www.w3.org/1999/xhtml">
<table>
<caption>Observatie/bepaling. Subject: Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen. Status: definitief</caption>
<tbody>
<tr>
<th>Code</th>
<th>Waarde</th>
</tr>
<tr>
<td>
<span title="Width of Wound (39125-0 - LOINC)">Width of Wound</span>
</td>
<td>2 cm</td>
</tr>
</tbody>
</table>
</div>
</text>
<status value="final"/>
<code>
<coding>
<system value="http://loinc.org"/>
<code value="39125-0"/>
<display value="Width of Wound"/>
</coding>
</code>
<subject>
<reference value="Patient/nl-core-Patient-01"/>
<type value="Patient"/>
<display value="Patient, Johanna Petronella Maria (Jo) van Putten-van der Giessen"/>
</subject>
<valueQuantity>
<value value="2"/>
<unit value="cm"/>
<system value="http://unitsofmeasure.org"/>
<code value="cm"/>
</valueQuantity>
</Observation>
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