add neurosift (#97)

* add neurosift
* add logo

docs/source/conf_extlinks.py

@@ -31,22 +31,22 @@
     'hdmf-common-schema-docs': ('https://hdmf-common-schema.readthedocs.io/en/stable/%s', '%s'),
     'hdmf-common-schema-src': ('https://github.com/hdmf-dev/hdmf-common-schema/%s', '%s'),
     'hdmf-z-docs': ('https://hdmf-zarr.readthedocs.io/en/latest/%s', '%s'),
-    'hdmf-z-src': ('https://github.com/hdmf-dev/hdmf-zarr/%s' ,'%s'),
+    'hdmf-z-src': ('https://github.com/hdmf-dev/hdmf-zarr/%s','%s'),
     'nwb-github-org': ('https://github.com/NeurodataWithoutBorders/%s', '%s'),
     'hdmf-github-org': ('https://github.com/hdmf-dev/%s', '%s'),
     'nwb-widgets-docs': ('https://github.com/NeurodataWithoutBorders/nwb-jupyter-widgets/%s', '%s'),
     'nwb-widgets-src': ('https://github.com/NeurodataWithoutBorders/nwb-jupyter-widgets/%s', '%s'),
     'caiman-docs': ('https://caiman.readthedocs.io/en/master/%s', '%s'),
-    'hdf5': ('https://www.hdfgroup.org/solutions/hdf5/%s','%s'),
+    'hdf5': ('https://www.hdfgroup.org/solutions/hdf5/%s', '%s'),
     'zarr': ('https://zarr.readthedocs.io/en/stable/%s', '%s'),
     'nix': ('https://g-node.github.io/nix/%s', '%s'),
     'bids': ('https://bids.neuroimaging.io/%s', '%s'),
     'dandi': ('https://dandiarchive.org/%s', '%s'),
     'nwb-overview-src': ('https://github.com/NeurodataWithoutBorders/nwb-overview/%s', '%s'),
     'nwb-main': ('https://www.nwb.org/%s', '%s'),
     'nwb-helpdesk': ('https://github.com/dandi/helpdesk/discussions/%s', '%s'),
-    # 'nwb-mailing-list': ('http://visitor.r20.constantcontact.com/manage/optin?v=001nQUq2GTjwCjZxK_V2'
-    #                      '-6RLElLJO1HMVtoNLJ-wGyDCukZQZxu2AFJmNh6NS0_lGMsWc2w9hZpeNn74HuWdv5RtLX9qX0o0Hy1P0hOgMrkm2NoGAX3VoY25wx8HAtIZwredcCuM0nCUGodpvoaue3SzQ%3D%3D', '%s'),
+    # 'nwb-mailing-list': (r'http://visitor.r20.constantcontact.com/manage/optin?v=001nQUq2GTjwCjZxK_V2'
+    #                      r'-6RLElLJO1HMVtoNLJ-wGyDCukZQZxu2AFJmNh6NS0_lGMsWc2w9hZpeNn74HuWdv5RtLX9qX0o0Hy1P0hOgMrkm2NoGAX3VoY25wx8HAtIZwredcCuM0nCUGodpvoaue3SzQ%3D%3D', '%s'),
     'datajoint': ('https://www.datajoint.org/%s', '%s'),
     'datajoint-elements': ('https://www.datajoint.com/elements/%s', '%s'),
     'openscope-databook': ('https://alleninstitute.github.io/openscope_databook/%s', '%s'),

docs/source/tools/neurosift/neurosift.rst

@@ -0,0 +1,21 @@
+.. _analysistools-neurosift:
+
+Neurosift
+---------
+
+.. short_description_start
+
+:ref:`analysistools-neurosift` provides interactive neuroscience visualizations in the browser. Neurosift caters to both individual users through its local mode, allowing the visualization of views directly from your device, as well as a remote access function for presenting your findings to other users on different machines.
+:bdg-link-primary:`Source <https://github.com/flatironinstitute/neurosift>`
+
+.. short_description_end
+
+With Neurosift, you have the ability to construct a multitude of synchronized visuals such as spike raster plots, audio spectrograms, videos, video annotations, position decode fields, timeseries graphs, and more.
+
+Neurosift is also integrated with DANDI Archive for visualizing NWB files directly in your browser. You can browse the contents of a dandiset directly in your browser, and visualize the items using Neurosift views. Here is an example:
+
+.. code-block::
+
+    https://flatironinstitute.github.io/neurosift/#/nwb?url=https://dandiarchive.s3.amazonaws.com/blobs/c86/cdf/c86cdfba-e1af-45a7-8dfd-d243adc20ced
+
+Replace the url query parameter with the appropriate URL for your NWB file on DANDI or anywhere else on the web.

docs/source/tools/tools_home.rst

@@ -10,6 +10,7 @@ Analysis and Visualization Tools
     :hidden:
 
     nwbwidgets/nwbwidgets
+    neurosift/neurosift
     nwbexplorer/nwbexplorer
     hdftools/hdftools
     spikeinterface/spikeinterface
@@ -51,6 +52,26 @@ Exploring NWB Files
     <br/>
     <br/>
 
+.. image:: neurosift/neurosift-logo.png
+    :class: align-left
+    :width: 180
+
+.. raw:: html
+
+    <br/>
+    <br/>
+    <br/>
+
+
+.. include::  neurosift/neurosift.rst
+        :start-after: .. short_description_start
+        :end-before: .. short_description_end
+
+.. raw:: html
+
+    <br/>
+    <br/>
+
 .. image:: nwbexplorer/nwbexplorer_screenshot.png
     :class: align-left
     :width: 180