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Added order of script execution
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howrigan authored Apr 17, 2023
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## UKB GWAS pipeline scripts written for Hail 0.2

These scripts were used to run the GWAS pipeline in Hail 0.2 for the [UK Biobank biomarker measurements](http://www.nealelab.is/blog/2019/9/16/biomarkers-gwas-results)

Here is the order of script execution:

1. irnt.biomarkers.py

2. create_phenotype_summary.biomarkers.py

3. build_pipelines.biomarkers.py

4. create_ldsc_hm3_table.py

5. load_mfi_ht.py

6. run_regressions.biomarkers.py

7. load_results_matrix_table.biomarkers.py

8. export_results.biomarkers.py

9. export_ldsc_sumstats_biomarkers.py

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