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Adds staging jinja/yaml file for letkf task (#1137)
Adds staging jinja/yaml file for letkf task, for staging files to `DATA` Towards #1091 --------- Co-authored-by: Cory Martin <[email protected]>
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Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,49 @@ | ||
###################################### | ||
# set some variables | ||
###################################### | ||
{% set gPDY = previous_cycle | to_YMD %} | ||
{% set gcyc = previous_cycle | strftime("%H") %} | ||
{% set PDY = current_cycle | to_YMD %} | ||
{% set cyc = current_cycle | strftime("%H") %} | ||
###################################### | ||
# create working directories | ||
###################################### | ||
mkdir: | ||
- "{{ DATA }}/Data" | ||
- "{{ DATA }}/obs" | ||
- "{{ DATA }}/INPUT" | ||
{% for mem in range(1, NMEM_ENS + 1) %} | ||
- "{{ DATA }}/ens/mem{{ '%03d' % mem }}" | ||
{% endfor %} | ||
copy: | ||
###################################### | ||
# copy mom input template | ||
###################################### | ||
- ["{{ PARMgfs }}/gdas/soca/fms/input.nml", "{{ DATA }}/mom_input.nml.tmpl"] | ||
###################################### | ||
# copy ensemble background files | ||
###################################### | ||
{% for mem in range(1, NMEM_ENS + 1) %} | ||
# define variables | ||
# Declare a dict of search and replace terms to GDUMP on each template | ||
{% set tmpl_dict = {'ROTDIR':ROTDIR, | ||
'RUN': GDUMP_ENS, | ||
'YMD':gPDY, | ||
'HH':gcyc, | ||
'MEMDIR':"mem" + '%03d' % mem} %} | ||
|
||
# Replace template variables with tmpl_dict, one key at a time | ||
# This must be done in a namespace to overcome jinja scoping | ||
# Variables set inside of a for loop are lost at the end of the loop | ||
# unless they are part of a namespace | ||
{% set com_prev_ocn = namespace(COM_OCEAN_HISTORY_MEM = COM_OCEAN_HISTORY_TMPL) %} | ||
{% set com_prev_ice = namespace(COM_ICE_HISTORY_MEM = COM_ICE_HISTORY_TMPL) %} | ||
{% for key in tmpl_dict.keys() %} | ||
{% set search_term = '${' + key + '}' %} | ||
{% set replace_term = tmpl_dict[key] %} | ||
{% set com_prev_ocn.COM_OCEAN_HISTORY_MEM = com_prev_ocn.COM_OCEAN_HISTORY_MEM.replace(search_term, replace_term) %} | ||
{% set com_prev_ice.COM_ICE_HISTORY_MEM = com_prev_ice.COM_ICE_HISTORY_MEM.replace(search_term, replace_term) %} | ||
{% endfor %} | ||
- ["{{ com_prev_ocn.COM_OCEAN_HISTORY_MEM }}/{{ GDUMP_ENS }}.ocean.t{{ gcyc }}z.inst.f006.nc", "{{ DATA }}/ens/mem{{ '%03d' % mem }}/{{ GDUMP_ENS }}.ocean.t{{ gcyc }}z.inst.f006.nc"] | ||
- ["{{ com_prev_ice.COM_ICE_HISTORY_MEM }}/{{ GDUMP_ENS }}.ice.t{{ gcyc }}z.inst.f006.nc", "{{ DATA }}/ens/mem{{ '%03d' % mem }}/{{ GDUMP_ENS }}.ice.t{{ gcyc }}z.inst.f006.nc"] | ||
{% endfor %} |
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###################################### | ||
# fix files to copy | ||
###################################### | ||
copy: | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/rossrad.dat", "{{ DATA }}/rossrad.dat"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/field_table", "{{ DATA }}/field_table"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/diag_table", "{{ DATA }}/diag_table"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/MOM_input", "{{ DATA }}/MOM_input"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/fields_metadata.yaml", "{{ DATA }}/fields_metadata.yaml"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/obsop_name_map.yaml", "{{ DATA }}/obsop_name_map.yaml"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/INPUT/grid_spec.nc", "{{ DATA }}/INPUT/grid_spec.nc"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/INPUT/hycom1_25.nc", "{{ DATA }}/INPUT/hycom1_25.nc"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/INPUT/layer_coord25.nc", "{{ DATA }}/INPUT/layer_coord25.nc"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/INPUT/ocean_hgrid.nc", "{{ DATA }}/INPUT/ocean_hgrid.nc"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/INPUT/ocean_mosaic.nc", "{{ DATA }}/INPUT/ocean_mosaic.nc"] | ||
- ["{{ SOCA_INPUT_FIX_DIR }}/INPUT/ocean_topog.nc", "{{ DATA }}/INPUT/ocean_topog.nc"] |
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