-
Notifications
You must be signed in to change notification settings - Fork 66
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Multi-tile-output #289
Multi-tile-output #289
Commits on Nov 8, 2017
-
Configuration menu - View commit details
-
Copy full SHA for 0d8cfbf - Browse repository at this point
Copy the full SHA 0d8cfbfView commit details
Commits on Nov 13, 2017
-
Configuration menu - View commit details
-
Copy full SHA for 06405fa - Browse repository at this point
Copy the full SHA 06405faView commit details
Commits on Dec 14, 2017
-
Configuration menu - View commit details
-
Copy full SHA for 15da54b - Browse repository at this point
Copy the full SHA 15da54bView commit details -
Configuration menu - View commit details
-
Copy full SHA for 5954626 - Browse repository at this point
Copy the full SHA 5954626View commit details
Commits on Jan 17, 2018
-
Configuration menu - View commit details
-
Copy full SHA for 45d02b5 - Browse repository at this point
Copy the full SHA 45d02b5View commit details
Commits on Feb 5, 2018
-
Added functionality to read PTRtave files (MITgcm#63)
* added reading functionality of PTRtave files * changed trname to travename to avoid duplication * Added the units back as [kg m-3]
Configuration menu - View commit details
-
Copy full SHA for d81f7dc - Browse repository at this point
Copy the full SHA d81f7dcView commit details
Commits on Feb 21, 2018
-
Configuration menu - View commit details
-
Copy full SHA for 42aa2be - Browse repository at this point
Copy the full SHA 42aa2beView commit details
Commits on Mar 5, 2018
-
Extract version number from git tag (MITgcm#72)
* Extract version number from git tag This keeps the version number in the documentation consistent with the code release. Code taken from MITgcm/MITgcm@96334be Closes MITgcm#71 * Fixing style errors. * Move import statement to conform with code linter * Make mds_store test work with xarray >=0.10.1 As noted in MITgcm#72 an upstream change in xarray broke one of the tests. This commit also modifies dependencies in setup.py to xarray >= 0.10.1
Configuration menu - View commit details
-
Copy full SHA for 4a2bc59 - Browse repository at this point
Copy the full SHA 4a2bc59View commit details
Commits on Apr 6, 2018
-
Generalizes _get_all_iternums in order to handle compressed data (MIT…
…gcm#77) * Generalizes _get_all_iternums in order to handle compressed data * fix excessive line length * Fixing style errors.
Configuration menu - View commit details
-
Copy full SHA for 298adcb - Browse repository at this point
Copy the full SHA 298adcbView commit details
Commits on Jun 8, 2018
-
Cast
prefix
to list if it isn't already one (MITgcm#79)* cast `prefix` to list if it isn't already one * Check for unicode strings too
Configuration menu - View commit details
-
Copy full SHA for d8127ce - Browse repository at this point
Copy the full SHA d8127ceView commit details
Commits on Jun 22, 2018
-
fix the problem with testing type of prefix (MITgcm#83)
* fix python2/3 compatibilty issue for string test * no need for extra line * Fixing style errors.
Configuration menu - View commit details
-
Copy full SHA for 46f3232 - Browse repository at this point
Copy the full SHA 46f3232View commit details
Commits on Jul 16, 2018
-
extend capabilities of read_raw_data (MITgcm#84)
* extend capabilities of read_raw_data * possibility to read part of the file, with offset and partial_read * choice of row/column major order * testing + better error handling * function will warn user if trying to pass inconsistent args * function checks byte offset < file size * Fixing style errors. * get it shorter * completing tests for codecov * Fixing style errors. * fix line length * fix line length * try to improve coverage * finalize request * remove blank lines * iteration on dtype cleaner * replace assert with raise error * try to fool code cov * fix indentation * codecov didn't bite the bait * fix error in testing
Configuration menu - View commit details
-
Copy full SHA for bb1e63c - Browse repository at this point
Copy the full SHA bb1e63cView commit details
Commits on Jul 17, 2018
-
Configuration menu - View commit details
-
Copy full SHA for 8f17b81 - Browse repository at this point
Copy the full SHA 8f17b81View commit details -
Configuration menu - View commit details
-
Copy full SHA for a3edf9e - Browse repository at this point
Copy the full SHA a3edf9eView commit details
Commits on Jul 30, 2018
-
Configuration menu - View commit details
-
Copy full SHA for 727552e - Browse repository at this point
Copy the full SHA 727552eView commit details -
Merge pull request MITgcm#86 from raphaeldussin/tag_v0.2.2
fix for RTD ? fix MITgcm#75
Configuration menu - View commit details
-
Copy full SHA for 21e8a89 - Browse repository at this point
Copy the full SHA 21e8a89View commit details
Commits on Aug 7, 2018
-
Configuration menu - View commit details
-
Copy full SHA for 72feddc - Browse repository at this point
Copy the full SHA 72feddcView commit details
Commits on Aug 10, 2018
-
Configuration menu - View commit details
-
Copy full SHA for 8a5488d - Browse repository at this point
Copy the full SHA 8a5488dView commit details
Commits on Aug 23, 2018
-
WIP refactoring of low level functions (MITgcm#87)
* refactoring of low level functions * Fixing style errors. * run flake8 * Fixing style errors. * unit test * fix style * changes requested pt1 * improvements on read_xy_chunk * padding in separate function * return numpy array or memmap * Fixing style errors. * fix line length * add more testing * stupid bug * more testing * Fixing style errors. * test for read_generic_data * Fixing style errors. * improve coverage * Fixing style errors. * unit test for read_all_variables * Fixing style errors. * corrections requested * eager mode for read_generic_data * read_3d_chunk fct * testing for read_3d_chunk * Fixing style errors. * read big chunks + testing * missing conflict * Fixing style errors. * Refactor read_all + test * Fixing style errors. * better docstrings * working on tests, pb memmap * Fixing style errors. * revisions * read_3d_chunk -> read_xyz_chunk * correction docstring * Fixing style errors. * correct name function in test * more docstrings * one case of memmap evaluation figured out + wrong test in read_xyz_chunk * Fixing style errors. * not strickly enforce memmap test * Fixing style errors.
Configuration menu - View commit details
-
Copy full SHA for 4da34ff - Browse repository at this point
Copy the full SHA 4da34ffView commit details
Commits on Sep 4, 2018
-
Configuration menu - View commit details
-
Copy full SHA for 39af349 - Browse repository at this point
Copy the full SHA 39af349View commit details -
Merge pull request MITgcm#94 from raphaeldussin/docedits
Update documentation with conda instructions
Configuration menu - View commit details
-
Copy full SHA for 64c588a - Browse repository at this point
Copy the full SHA 64c588aView commit details
Commits on Sep 10, 2018
-
Add seaice and thsice native output (MITgcm#96)
* add native output description for thsice and seaice * maintaining the tradition of not getting it right the first time * try to make standard_names more or less CF compliant * Fixing style errors. * Fixing style errors. * Fixing style errors. * Fixing style errors. * Fixing style errors. * Fixing style errors. * Fixing style errors. * Fixing style errors. * insert line breaks in four long lines
Configuration menu - View commit details
-
Copy full SHA for 1cbf6d3 - Browse repository at this point
Copy the full SHA 1cbf6d3View commit details
Commits on Sep 14, 2018
-
clean refactored read_mds (MITgcm#93)
* clean refactored read_mds * test extra_metadata * Fixing style errors. * corrections requested * Fixing style errors. * fix strickler * replaced dask_delayed by use_dask * fix cosmetic errors * Fixing style errors. * fix cosmetic errors * get extra metadata * Fixing style errors. * fix assert * use get_extra_metadata in read_mds * refactor testing, small/big to 2D/3D * Fixing style errors.
Configuration menu - View commit details
-
Copy full SHA for 04223e2 - Browse repository at this point
Copy the full SHA 04223e2View commit details
Commits on Sep 17, 2018
-
refactoring mds_store to include the option to pass extra metadata (M…
…ITgcm#97) * clean PR * clean up * Fixing style errors. * add test for extra_metadata * Fixing style errors. * fix line length * fix extra_metadata variables * Fixing style errors. * fix line length
Configuration menu - View commit details
-
Copy full SHA for 86e5003 - Browse repository at this point
Copy the full SHA 86e5003View commit details
Commits on Sep 22, 2018
-
* wip: almost done * Fixing style errors. * fix bug * Fixing style errors. * fix test
Configuration menu - View commit details
-
Copy full SHA for 300739e - Browse repository at this point
Copy the full SHA 300739eView commit details -
added angles to llc grid coords (MITgcm#92)
* added angles to llc grid coords * Fixing style errors.
Configuration menu - View commit details
-
Copy full SHA for 67bf9bb - Browse repository at this point
Copy the full SHA 67bf9bbView commit details
Commits on Nov 9, 2018
-
Fix bug llc, fixes MITgcm#102 (MITgcm#104)
* correcting a bug, fixes MITgcm#102 * more comments * testing for bad nx,ny combination * Fixing style errors. * cosmetics * Fixing style errors.
Configuration menu - View commit details
-
Copy full SHA for 410af6e - Browse repository at this point
Copy the full SHA 410af6eView commit details
Commits on Nov 10, 2018
-
added extra grid variables to variables.py
* extra variables from MITgcm/model/src/write_grid.F * to do: add sigma coordinate variables
Configuration menu - View commit details
-
Copy full SHA for 71cb8d5 - Browse repository at this point
Copy the full SHA 71cb8d5View commit details -
subroutines to read extra grid vars
* only grabs variables when they exist * look for variables in data_dir not grid_dir
Configuration menu - View commit details
-
Copy full SHA for 35073cf - Browse repository at this point
Copy the full SHA 35073cfView commit details -
Configuration menu - View commit details
-
Copy full SHA for 589b347 - Browse repository at this point
Copy the full SHA 589b347View commit details -
Configuration menu - View commit details
-
Copy full SHA for a9c402b - Browse repository at this point
Copy the full SHA a9c402bView commit details -
Configuration menu - View commit details
-
Copy full SHA for f32ad02 - Browse repository at this point
Copy the full SHA f32ad02View commit details -
Configuration menu - View commit details
-
Copy full SHA for d4b3c3b - Browse repository at this point
Copy the full SHA d4b3c3bView commit details -
Configuration menu - View commit details
-
Copy full SHA for e5d0ba1 - Browse repository at this point
Copy the full SHA e5d0ba1View commit details
Commits on Nov 25, 2018
-
Remove excess extra_grid_vars functions
* look for extra grid prefixes in dir, only add these to all_grid_vars * look for extra grid variables in grid_dir, not data_dir
Configuration menu - View commit details
-
Copy full SHA for 0cac299 - Browse repository at this point
Copy the full SHA 0cac299View commit details -
Configuration menu - View commit details
-
Copy full SHA for a2ab37f - Browse repository at this point
Copy the full SHA a2ab37fView commit details
Commits on Dec 17, 2018
-
Merge pull request MITgcm#110 from timothyas/extra-grid-vars
Extra grid vars
Configuration menu - View commit details
-
Copy full SHA for 73fae38 - Browse repository at this point
Copy the full SHA 73fae38View commit details
Commits on Jan 14, 2019
-
transfer test data to figshare (MITgcm#115)
* transfer test data to figshare * python2 compat * Fixing style errors. * make strickler happier * Fixing style errors. * md5+cache+doc * Fixing style errors. * fix * make it py2 compat
Configuration menu - View commit details
-
Copy full SHA for 4bf2a40 - Browse repository at this point
Copy the full SHA 4bf2a40View commit details
Commits on Jan 15, 2019
-
Read mitgrid files (MITgcm#114)
* start working on reading grid * read ext grid * works for llc * works with aste+docstring * Fixing style errors. * fix cosmetics * fix cosmetics * fixes * Fixing style errors. * testing * Fixing style errors. * fix strickler * add link/md5 * fix strickler * more testing * Fixing style errors. * fix strickler * fix strickler * make dask lazy * Fixing style errors. * fix from strickler
Configuration menu - View commit details
-
Copy full SHA for 6aa98ca - Browse repository at this point
Copy the full SHA 6aa98caView commit details
Commits on Jan 22, 2019
-
silly bug read grid (MITgcm#117)
* silly bug * more testing * Fixing style errors. * fix line length * fix striclker * remove debug print
Configuration menu - View commit details
-
Copy full SHA for 274f811 - Browse repository at this point
Copy the full SHA 274f811View commit details -
* fix numerous warnings * fix numerous warnings * fix line length * fix line length * Fixing style errors. * Fixing style errors. * fix * Fixing style errors. * more testing * Fixing style errors. * remove duplicate * needs unbroken line * coverage
Configuration menu - View commit details
-
Copy full SHA for 008cbc3 - Browse repository at this point
Copy the full SHA 008cbc3View commit details
Commits on Feb 18, 2019
-
Write binary files from xmitgcm (MITgcm#118)
* work on write function * split in various functions * able to rebuild facets * needs new func * bugfix + add testing * funcs to compact * Fixing style errors. * tests in * Fixing style errors. * coverage * fix test * cleaner solution * precision->dtype * missing items
Configuration menu - View commit details
-
Copy full SHA for ddcb898 - Browse repository at this point
Copy the full SHA ddcb898View commit details
Commits on Mar 18, 2019
-
Calculate binary masks from hFac variables (MITgcm#120)
* Meta data for mask(C/W/S) variables * Add function to compute mask variables from hFac * Compute masks via binary op to save memory * Test mask values by ensuring mask*hFac == hFac * Fixing style errors. * test mask values with xr.testing.assert_equal rather than .all()
Configuration menu - View commit details
-
Copy full SHA for 3cac02a - Browse repository at this point
Copy the full SHA 3cac02aView commit details
Commits on Mar 26, 2019
-
Configuration menu - View commit details
-
Copy full SHA for 6464531 - Browse repository at this point
Copy the full SHA 6464531View commit details
Commits on Mar 28, 2019
-
add new CI config (MITgcm#125)
* test new xarray * add environment * fix typo * add conda forge channel * test against xarray master * more testing env * add new testing * dependency not supported * update travis
Configuration menu - View commit details
-
Copy full SHA for 4155cda - Browse repository at this point
Copy the full SHA 4155cdaView commit details
Commits on Apr 30, 2019
-
Configuration menu - View commit details
-
Copy full SHA for 8e949f2 - Browse repository at this point
Copy the full SHA 8e949f2View commit details -
Configuration menu - View commit details
-
Copy full SHA for bc48c88 - Browse repository at this point
Copy the full SHA bc48c88View commit details -
Configuration menu - View commit details
-
Copy full SHA for e85a2b8 - Browse repository at this point
Copy the full SHA e85a2b8View commit details
Commits on May 1, 2019
-
* try fix rtd build * fix conda? * try fix rtd build
Configuration menu - View commit details
-
Copy full SHA for eb44671 - Browse repository at this point
Copy the full SHA eb44671View commit details -
* try fix rtd build * fix conda? * try fix rtd build * install xmitgcm * install xmitgcm
Configuration menu - View commit details
-
Copy full SHA for 170645a - Browse repository at this point
Copy the full SHA 170645aView commit details
Commits on May 2, 2019
-
New docs to write binary files (MITgcm#136)
* doc writing binary file * update index
Configuration menu - View commit details
-
Copy full SHA for d453ce4 - Browse repository at this point
Copy the full SHA d453ce4View commit details -
Configuration menu - View commit details
-
Copy full SHA for d951bc7 - Browse repository at this point
Copy the full SHA d951bc7View commit details -
Configuration menu - View commit details
-
Copy full SHA for 0e330f2 - Browse repository at this point
Copy the full SHA 0e330f2View commit details -
Configuration menu - View commit details
-
Copy full SHA for 140888a - Browse repository at this point
Copy the full SHA 140888aView commit details
Commits on May 18, 2019
-
Configuration menu - View commit details
-
Copy full SHA for ff30a93 - Browse repository at this point
Copy the full SHA ff30a93View commit details
Commits on May 20, 2019
-
fix for 2d diagnostics llc bug (MITgcm#146)
* fix for 2d diags issue * remove comment * remove old numpy env from ci
Configuration menu - View commit details
-
Copy full SHA for fa46d1d - Browse repository at this point
Copy the full SHA fa46d1dView commit details -
also search in grid_dir for avail_diags.log (MITgcm#147)
* also search in grid_dir for avail_diags.log * added test
Configuration menu - View commit details
-
Copy full SHA for 2cac4bf - Browse repository at this point
Copy the full SHA 2cac4bfView commit details -
Cleanup for release (MITgcm#150)
* updated whats new * versioneer stuff * remove old version string * exclude versioneer from coverage * exclude more versioneer stuff from coverage
Configuration menu - View commit details
-
Copy full SHA for 264f9c6 - Browse repository at this point
Copy the full SHA 264f9c6View commit details
Commits on Jun 19, 2019
-
add llcreader module (MITgcm#152)
* added llcreader module * before refactor * wip: optimizing * wip: more performance improvements * wrapping up * major refactor; 1000x faster :) * working on docs * new models and tests * update ci stuff * verbose travis * debugging tests * modify imports * set conda-forge channel * back to importorskip * refactor of llcmodel internals * remove unnecessary class * docstring update * trying to fix tests again * add missing module
Configuration menu - View commit details
-
Copy full SHA for 98ea1e7 - Browse repository at this point
Copy the full SHA 98ea1e7View commit details -
Configuration menu - View commit details
-
Copy full SHA for 5d47c04 - Browse repository at this point
Copy the full SHA 5d47c04View commit details -
Configuration menu - View commit details
-
Copy full SHA for b5934f1 - Browse repository at this point
Copy the full SHA b5934f1View commit details -
Configuration menu - View commit details
-
Copy full SHA for c8b2d05 - Browse repository at this point
Copy the full SHA c8b2d05View commit details
Commits on Jul 11, 2019
-
Configuration menu - View commit details
-
Copy full SHA for 5cc6f69 - Browse repository at this point
Copy the full SHA 5cc6f69View commit details -
re-added bugfix from MITgcm#155 which was accidentally overwritten du…
…ring the release of 0.4.0
Configuration menu - View commit details
-
Copy full SHA for d3ecf98 - Browse repository at this point
Copy the full SHA d3ecf98View commit details -
Configuration menu - View commit details
-
Copy full SHA for 0dce402 - Browse repository at this point
Copy the full SHA 0dce402View commit details
Commits on Aug 6, 2019
-
Configuration menu - View commit details
-
Copy full SHA for 4712763 - Browse repository at this point
Copy the full SHA 4712763View commit details
Commits on Sep 5, 2019
-
Configuration menu - View commit details
-
Copy full SHA for e7243d1 - Browse repository at this point
Copy the full SHA e7243d1View commit details -
Configuration menu - View commit details
-
Copy full SHA for 20d8d4f - Browse repository at this point
Copy the full SHA 20d8d4fView commit details
Commits on Sep 11, 2019
-
Fix fsspec keyword arg bug (MITgcm#170)
* wip * increased fsspec dependency to 0.4.4 and simplified code * remove looseversion
Configuration menu - View commit details
-
Copy full SHA for 31cbe08 - Browse repository at this point
Copy the full SHA 31cbe08View commit details
Commits on Sep 27, 2019
-
Configuration menu - View commit details
-
Copy full SHA for c276286 - Browse repository at this point
Copy the full SHA c276286View commit details
Commits on Oct 25, 2019
-
Use cache for listing directories (MITgcm#168)
* wrote file_utils * wrote file_utils * almost passing tests * add cachetools to requirements * move cachetools install to pip * changed cache mechanism * fix messed up tar files * make tests work
Configuration menu - View commit details
-
Copy full SHA for f865eab - Browse repository at this point
Copy the full SHA f865eabView commit details -
Configuration menu - View commit details
-
Copy full SHA for 95b2cb5 - Browse repository at this point
Copy the full SHA 95b2cb5View commit details -
Read data with level subsets, read namelists. (MITgcm#149)
* Added parse_namelist * Add some options for levels * Working implementation of levels subsetting * Add warning and options to namelist parser * Merged upstream/master changes * Small fix | Added in docstring | Added 2 tests * add back fixture * wrap tmpdir in str https://stackoverflow.com/questions/27034001/os-path-join-fails-with-typeerror-object-of-type-localpath-has-no-len
Configuration menu - View commit details
-
Copy full SHA for cfe8287 - Browse repository at this point
Copy the full SHA cfe8287View commit details -
Modify datetime decoding (MITgcm#177)
* fix MITgcm#174 * add cftime to ci env * serialize to zarr not netcdf * add zarr to py2.7 env
Configuration menu - View commit details
-
Copy full SHA for 53686ca - Browse repository at this point
Copy the full SHA 53686caView commit details
Commits on Nov 13, 2019
-
Configuration menu - View commit details
-
Copy full SHA for 55555c3 - Browse repository at this point
Copy the full SHA 55555c3View commit details
Commits on Nov 22, 2019
-
Configuration menu - View commit details
-
Copy full SHA for 923bbf3 - Browse repository at this point
Copy the full SHA 923bbf3View commit details
Commits on Feb 26, 2020
-
Configuration menu - View commit details
-
Copy full SHA for cc84ee3 - Browse repository at this point
Copy the full SHA cc84ee3View commit details
Commits on Mar 6, 2020
-
Python 3.8 compatibility (MITgcm#194)
* Python 3.8 compatibility * files for Travis CI * Added py27 compatibility Co-authored-by: Uchida Takaya <[email protected]>
Takaya Uchida and Uchida Takaya authoredMar 6, 2020 Configuration menu - View commit details
-
Copy full SHA for 48c72a9 - Browse repository at this point
Copy the full SHA 48c72a9View commit details
Commits on Apr 14, 2020
-
Configuration menu - View commit details
-
Copy full SHA for 172ab1b - Browse repository at this point
Copy the full SHA 172ab1bView commit details
Commits on Jun 3, 2020
-
iter_stop matches last model date (MITgcm#203)
Solves MITgcm#193 Co-authored-by: Antonio Quintana <[email protected]>
Configuration menu - View commit details
-
Copy full SHA for 4841b4b - Browse repository at this point
Copy the full SHA 4841b4bView commit details
Commits on Jun 4, 2020
-
llcreader: get grid info from portal (MITgcm#197)
* access to llc2160 grid is a go, with a couple caveats for now * use grid var names not filenames, get vertical grid vars working * lil typo * fixes loading grid dir issues * it works for llc2160 * add directory to some LLC4320 grid vars * separate grid metadata function, add shrunk_grid flag * add grid_varnames to paramter list * test that grid variables show up in portal datasets * prefixes->variables * try Zl... * extra logic to create Zl, Zu, and Zp1 * make reading grid optional * wow, not copying dicts really messes things up * only build Zu, Zl if RF is there * shouldn't kp1 have nz+1 levels * only read grid if grid_varnames has entries * also test selected k_p1 levels * typo... * ... more typos... * rhoref, extra dx/dy metrics * add new metrics to test * typos, and add rhoRef to vgrid prefixes * load vgrid as one big chunk, all at once. test it too! * oops, fixed test * fix for global vgrid vars... what about layers.. tbd * cleanup vgrid check * cleanup grid var dict situation * also test latlon vgrid coord chunking * faces->ll * update docs * tiny typo * added more 4320 grid files
Configuration menu - View commit details
-
Copy full SHA for c65bc73 - Browse repository at this point
Copy the full SHA c65bc73View commit details
Commits on Jun 18, 2020
-
add xg and yg to llcreader known_models (MITgcm#208)
* add xg and yg to llcreader known_models * add other grid variables
Configuration menu - View commit details
-
Copy full SHA for 79baec6 - Browse repository at this point
Copy the full SHA 79baec6View commit details
Commits on Sep 30, 2020
-
* init gha files * add aiohttp * use cache v2 and goanpeca->conda-incubator * trying to recreate GHA error... * try sorted lists? * try without aiohttp on py27 * no need for travis yml * no need for coveragerc
Configuration menu - View commit details
-
Copy full SHA for 5aba259 - Browse repository at this point
Copy the full SHA 5aba259View commit details
Commits on Oct 12, 2020
-
python 2.7 env with old zarr (MITgcm#226)
* attempt to fix py27 with old zarr * alternate soln with setup * didn't work, back to first soln
Configuration menu - View commit details
-
Copy full SHA for 929fb05 - Browse repository at this point
Copy the full SHA 929fb05View commit details
Commits on Nov 3, 2020
-
Configuration menu - View commit details
-
Copy full SHA for 7968355 - Browse repository at this point
Copy the full SHA 7968355View commit details
Commits on Nov 12, 2020
-
Configuration menu - View commit details
-
Copy full SHA for 1a2990f - Browse repository at this point
Copy the full SHA 1a2990fView commit details
Commits on Nov 13, 2020
-
Fix llcreader klevels bug (MITgcm#225)
* empty commit to trigger CI * add test for k_levels=[1] * add explicit test for MITgcm#233 * test for bug in llc90 * fixes MITgcm#224 * resolve final bugs
Configuration menu - View commit details
-
Copy full SHA for e68b3e5 - Browse repository at this point
Copy the full SHA e68b3e5View commit details
Commits on Nov 16, 2020
-
llcreader + ASTE Release 1 (MITgcm#231)
* very rough draft .... almost have all tiles correct... * bering strait working * all faces accounted for ... now to code it better... * quick prefix fix * look for meta file for data prec, otherwise use class default * debugged ... was looking in grid dir * to aws * prefix bug * give standard dimensions some attrs for xgcm * temporary aws changes * look for extra grid var filename prefixes * semi general padding for non shrunk fields * slightly better * lots of variables * added KPP nonlocal salt/temp flux * dtype from meta prop to dask array creation * some small bugs... * provide dtype apriori, reading on the fly too slow. revert utils * semi better handling of index key * no latlon for aste * specify iters for nonuniform step * aws nested store, specify iters, add tests * tests actually pass locally... * python 3 prints * ASTE documentation * pretty it up * hopefully clearer about iters vs iter params * change some wording * update ref names and order * fixed up padding logic * update that aste ref ... again * get my face back! * _pad_facet sufficiently documented...with pics
Configuration menu - View commit details
-
Copy full SHA for f9e1b57 - Browse repository at this point
Copy the full SHA f9e1b57View commit details -
feat: IMPLEMENTS CHECKING FOR VARIABLE MATES (MITgcm#237)
* feat: IMPLEMENTS CHAECKING FOR VARIABLE MATES On a latlon grid some variables have mates. This commit will produce a meaningful error if attempting to use `get_dataset` or `faces_dataset_to_latlon` to load a variable without its mate. See Github issue MITgcm#234 * test: ADDED TEST FOR THE MATE ERROR * test: REMOVED TEST FOR VECTOR MATE ERROR removed test for vector mate error to determine whether CI problems are coming from the test or an xarray-master commit * fix: ADDED TEST BACK AND CHANGED ARGUMENTS
Configuration menu - View commit details
-
Copy full SHA for 46546d1 - Browse repository at this point
Copy the full SHA 46546d1View commit details -
fixed probable typo for 'coordinate' entry in dimensions dictionary (M…
…ITgcm#236) convention here seems to be XC=dict(dims=["j", "i"], attrs=dict( standard_name="longitude", long_name="longitude", units="degrees_east", coordinate="YC XC")), some instances fixed where "coordinate" was spelled "coordinates". May have no effect.
Configuration menu - View commit details
-
Copy full SHA for 3c88d45 - Browse repository at this point
Copy the full SHA 3c88d45View commit details
Commits on Nov 20, 2020
-
feat: CHECKS ITERATION PARAMETERS WHEN GETTING LLCMODEL DATASETS (MIT…
…gcm#240) * feat: CHECKS ITERATION PARAMETERS WHEN GETTING LLCMODEL DATASETS When loading datasets using the llcreader the user is able to specify the iteration start, stop and step. These can also be specified as attributes in the `BaseLLCModel`. This commit introduces a check that compares the `iter_start` and `iter_step` fed into `get_dataset` with the `BaseLLCModel` attributes. If they are found to be incompatible a warning is triggered. A warning over an Error was chosen as subsuquent code may still execute successfully even if there is a mismatch between the user specified and `BaseLLCModel` derived values for `iter_start` and `iter_stop`. * refactor: CHANGED WARNING TO RUNTIMEWARNING * test: ADDED TESTS FOR ITERATION CHECKS * feat: ADDED CHECK ITERS FUNCTION * feat/refac: REORDERS LOADING AND CHECKING OF ITERATION PARAMS Currently if one tries to load an ECCO portal model by specifying iterations, an error is raised. This is due to the model having attributes `iter_start`, `iter_step` and `iter_stop`. If the user tries to call `get_dataset` with a list `iters` the function first reads in the `iter_params` from the model's attributes. The function then goes on to check that none of the `iter_params` are defined. Upon finding they have been defined the function raises an error. The refactor does the following: (1) Check to see if the user has set any `iter_params` in the function call. (i) If they have, check the user hasn't set `iters`. If the user has set iters there's a problem, so raise an error. (ii) If no `iters` are set then use the user set `iter_params` (2) If no user set `iter_params` try reading in a user set `iters` and use this (3) If still no luck, try reading the model `iter_params`. If any of them are `None` keep going... (4) Finally try reading the model `iters`. (5) If nothing has been found then raise an error about the lack of iteration instructions. (6) Check the `iter_params` or `iters` for consistency with the models attributes. * test: UPDATED TESTS - Refactored the ecco portal tests - Added an aste portal test * fix miniconda action Co-authored-by: Ryan Abernathey <[email protected]>
Configuration menu - View commit details
-
Copy full SHA for fba360b - Browse repository at this point
Copy the full SHA fba360bView commit details -
Configuration menu - View commit details
-
Copy full SHA for dfab5be - Browse repository at this point
Copy the full SHA dfab5beView commit details -
Configuration menu - View commit details
-
Copy full SHA for 6b664ce - Browse repository at this point
Copy the full SHA 6b664ceView commit details
Commits on Nov 24, 2020
-
Configuration menu - View commit details
-
Copy full SHA for 72f327b - Browse repository at this point
Copy the full SHA 72f327bView commit details
Commits on Dec 3, 2020
-
Configuration menu - View commit details
-
Copy full SHA for 843a3ce - Browse repository at this point
Copy the full SHA 843a3ceView commit details
Commits on Jan 12, 2021
-
Configuration menu - View commit details
-
Copy full SHA for ec8cacf - Browse repository at this point
Copy the full SHA ec8cacfView commit details -
Configuration menu - View commit details
-
Copy full SHA for 95c708f - Browse repository at this point
Copy the full SHA 95c708fView commit details
Commits on Jan 19, 2021
-
Update xarray master ci (MITgcm#248)
* py36->py37 for latest xarray * filename * drop ci for 2.7, 3.6. Add 3.9 * update url, drop 2-3.6 * specify python>=3.7 * update dependencies in docs/readme
Configuration menu - View commit details
-
Copy full SHA for fb87e5c - Browse repository at this point
Copy the full SHA fb87e5cView commit details
Commits on Jan 21, 2021
-
fix variable metadata typos (MITgcm#249)
* fix variable metadata typos * Update variables.py * Update variables.py some more adjoint fixes * Update variables.py * fix two more instances of sloppiness * replace "psu" by "g/kg" Co-authored-by: Timothy Smith <[email protected]> Co-authored-by: Martin Losch <[email protected]>
Configuration menu - View commit details
-
Copy full SHA for e4d02ef - Browse repository at this point
Copy the full SHA e4d02efView commit details
Commits on Feb 11, 2021
-
Add pleiades grid path & better grid_path error message (MITgcm#255)
* look for grid path before trying to read, allow user to provide grid_path * add grid paths * remove grid_path arg * first try making sverdrup, then do portal * same thing on Pleiades * move sverdrup/pleiades tests to own module etc * remove extra test module, modify model fixture
Configuration menu - View commit details
-
Copy full SHA for e6ee132 - Browse repository at this point
Copy the full SHA e6ee132View commit details
Commits on Mar 2, 2021
-
Cube Sphere support (MITgcm#98)
* add read_CS_chunk * Fixing style errors. * add read_CS_chunk * fix tests * ny in terms of global ny, passes test_read_mds * Fixing style errors. * Fixing style errors. * passes more tests * Fixing style errors. * all test_utils passed * 3 tests to go * Fixing style errors. * fix typo * revert to chunks * test read_CS_chunks, get_grid_from_input working for CS * add figshare dl link * fix ny size * read_mds works * tests utils fixed * mds_store.py should now work with cubed sphere grid * fix tests CS * add possibility for nx>ny Co-authored-by: stickler-ci <[email protected]> Co-authored-by: Aaron Schneider <[email protected]>
Configuration menu - View commit details
-
Copy full SHA for 26fa060 - Browse repository at this point
Copy the full SHA 26fa060View commit details -
* Update usage.rst * Update usage.rst * address atmospheric configurations
Configuration menu - View commit details
-
Copy full SHA for 1324448 - Browse repository at this point
Copy the full SHA 1324448View commit details -
Configuration menu - View commit details
-
Copy full SHA for 2dea547 - Browse repository at this point
Copy the full SHA 2dea547View commit details
Commits on Apr 14, 2021
-
Configuration menu - View commit details
-
Copy full SHA for 41c10bc - Browse repository at this point
Copy the full SHA 41c10bcView commit details
Commits on May 5, 2021
-
Merge pull request MITgcm#260 from timothyas/xr_master_ci
Minor update xarray master CI workflow
Configuration menu - View commit details
-
Copy full SHA for 3673f59 - Browse repository at this point
Copy the full SHA 3673f59View commit details
Commits on May 17, 2021
-
modified open_mdsdataset to add extra_variables (MITgcm#205)
* modified open_mdsdataset to add extra_variables * Backwards compatible * modified open_mdsdataset to add extra_variables * Backwards compatible * add tests and extend docstring * only copy file if input is available. Co-authored-by: Spencer Jones <[email protected]> Co-authored-by: Aaron Schneider <[email protected]>
Configuration menu - View commit details
-
Copy full SHA for e9b2aaa - Browse repository at this point
Copy the full SHA e9b2aaaView commit details
Commits on May 28, 2021
-
fix combine_by_coords (MITgcm#267)
* fix combine_by_coords * change to new only for versions newer than previous xarray version * fix tests
Configuration menu - View commit details
-
Copy full SHA for 403039b - Browse repository at this point
Copy the full SHA 403039bView commit details
Commits on Aug 5, 2021
-
Configuration menu - View commit details
-
Copy full SHA for f5bcb5b - Browse repository at this point
Copy the full SHA f5bcb5bView commit details -
Configuration menu - View commit details
-
Copy full SHA for 331ae94 - Browse repository at this point
Copy the full SHA 331ae94View commit details -
Configuration menu - View commit details
-
Copy full SHA for 9ea819f - Browse repository at this point
Copy the full SHA 9ea819fView commit details -
Configuration menu - View commit details
-
Copy full SHA for 4b5eec3 - Browse repository at this point
Copy the full SHA 4b5eec3View commit details -
Configuration menu - View commit details
-
Copy full SHA for 56a4f61 - Browse repository at this point
Copy the full SHA 56a4f61View commit details -
Configuration menu - View commit details
-
Copy full SHA for cc2a5af - Browse repository at this point
Copy the full SHA cc2a5afView commit details
Commits on Nov 23, 2021
-
Configuration menu - View commit details
-
Copy full SHA for cb012dd - Browse repository at this point
Copy the full SHA cb012ddView commit details -
Configuration menu - View commit details
-
Copy full SHA for 57009ef - Browse repository at this point
Copy the full SHA 57009efView commit details -
Configuration menu - View commit details
-
Copy full SHA for 2a69f97 - Browse repository at this point
Copy the full SHA 2a69f97View commit details