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Adding link to ontogenesis chapter on annotations. (#771)
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* Adding link to ontogenesis chapter on annotations.

See also OBOAcademy/obook#500

* fix codespell. See #756
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cmungall authored May 31, 2024
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2 changes: 1 addition & 1 deletion docs/guide/associations.rst
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Expand Up @@ -82,9 +82,9 @@ or any is-a :term:`Descendant`:
runoak -i sqlite:obo:hp -G hpoa -g phenotype.hpoa associations -p i HP:0011482
Further reading
---------------

- `Ontogenesis article on associations <https://ontogenesis.knowledgeblog.org/50/>`_
- `Gene Ontology: tool for the unification of biology <https://www.nature.com/articles/ng0500_25>`_
- `On beyond Gruber: "Ontologies" in today's biomedical information systems and the limits of OWL <https://pubmed.ncbi.nlm.nih.gov/34384571/>`_.
2 changes: 1 addition & 1 deletion pyproject.toml
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Expand Up @@ -93,7 +93,7 @@ reverse_relative = true
[tool.codespell]
skip = '.git,*.pdf,*.svg,poetry.lock,*.obo,*.ttl,*.ofn,*.gaf,*.tsv,*.json,input'
ignore-regex = '(^\s*"image/\S+": ".*|[a-z]*\.\.\.)'
ignore-words-list = 'ptd,ot,nd,ser,oger,gard,te,fo,fof,bu,ue,ois,processus,infarction,infarctions'
ignore-words-list = 'ptd,ot,nd,ser,oger,gard,te,fo,fof,bu,ue,ois,processus,infarction,infarctions,assertIn,morpholgy'

[tool.ruff]
lint.extend-ignore = [
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