Sequence alignment operators #10
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Lightning modules:
beignet.nn.MSALightningModule, stand-alone multiple sequence alignment (MSA) modelPyTorch datasets:
beignet.datasets.RandomSequenceDataset, generate random sequencesPyTorch modules:
beignet.nn.MSA, learnable multiple sequence alignment (MSA)PyTorch operators:
beignet.operators.needleman_wunsch, differentiable global sequence alignmentbeignet.operators.smith_waterman, differentiable local sequence alignment