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Releases: DeepChainBio/bio-transformers

release version 0.1.17

01 Mar 15:56
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Fix transformers requirements.

release 0.1.16 package version

21 Oct 15:48
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  • Add ligthning_utils tools to train with 'DDP' accelerator

release package 0.1.15

17 Sep 16:01
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Fix ray issue when compute embeddings

Release package 0.1.14

17 Sep 06:41
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  • Fix Distributed sampler for data sampling data efficiency in pytorch-lightning

update package release 0.1.13

06 Sep 13:44
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update package 0.1.13

release version 0.1.12

01 Sep 13:52
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Fix get_batch_indices functions

release version 0.1.11

01 Sep 13:34
efff2cd
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Update finetune functions:

  • add shuffling of pre-computed batches
  • remove batch arguments
  • add crop_size arguments to manage different sequence length

release package 0.1.10

20 Aug 11:45
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add model esm_msa1b_t12_100M_UR50S

release version 0.1.9

11 Aug 08:37
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Fix alphabet dataloader standard tokens

release package version 0.1.8

11 Aug 06:48
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  • Update AlphabetDataloader class
  • Add mutation score function