…#112)

* Added support for tensorflow

* Updates to get tests passing

* Or --> And

* Moving modopt to allow working with tensorflow

* Fix issues with wos

* Fix all flakes finally!

* Update modopt/base/backend.py

Co-authored-by: Samuel Farrens <[email protected]>

* Update modopt/base/backend.py

Co-authored-by: Samuel Farrens <[email protected]>

* Minute updates to codes

* Add dynamic module

* Fix docu

* Fix PEP

Co-authored-by: chaithyagr <[email protected]>
Co-authored-by: Samuel Farrens <[email protected]>

* Fix issues

* Add right tests

* Fix PEP

Co-authored-by: chaithyagr <[email protected]>

Co-authored-by: chaithyagr <[email protected]>

* Minor bug fix, remove elif

* Add tests for backend

* Fix tests

* Add tests

* Remove cupy

* PEP fixes

* Fix PEP

* Fix PEP and update

* Final PEP

* Update setup.cfg

Co-authored-by: Samuel Farrens <[email protected]>

* Update test_base.py

Co-authored-by: chaithyagr <[email protected]>
Co-authored-by: Samuel Farrens <[email protected]>

* updated GPU dependencies

* added logo to manifest

* updated package version and release date

* unpinned dependencies

* updated pinned documentation dependency versions

* Version 1.5.1 patch release (#114)

* Add support for tensorflow backend which allows for differentiability (#112)

* Added support for tensorflow

* Updates to get tests passing

* Or --> And

* Moving modopt to allow working with tensorflow

* Fix issues with wos

* Fix all flakes finally!

* Update modopt/base/backend.py

Co-authored-by: Samuel Farrens <[email protected]>

* Update modopt/base/backend.py

Co-authored-by: Samuel Farrens <[email protected]>

* Minute updates to codes

* Add dynamic module

* Fix docu

* Fix PEP

Co-authored-by: chaithyagr <[email protected]>
Co-authored-by: Samuel Farrens <[email protected]>

* Fix 115 (#116)

* Fix issues

* Add right tests

* Fix PEP

Co-authored-by: chaithyagr <[email protected]>

* Minor bug fix, remove elif (#124)

Co-authored-by: chaithyagr <[email protected]>

* Add tests for modopt.base.backend and fix minute bug uncovered (#126)

* Minor bug fix, remove elif

* Add tests for backend

* Fix tests

* Add tests

* Remove cupy

* PEP fixes

* Fix PEP

* Fix PEP and update

* Final PEP

* Update setup.cfg

Co-authored-by: Samuel Farrens <[email protected]>

* Update test_base.py

Co-authored-by: chaithyagr <[email protected]>
Co-authored-by: Samuel Farrens <[email protected]>

* Release cleanup (#128)

* updated GPU dependencies

* added logo to manifest

* updated package version and release date

Co-authored-by: Chaithya G R <[email protected]>
Co-authored-by: chaithyagr <[email protected]>

* make algorithms a module.

* add Gradient Descent Algorithms

* enforce WPS compliance.

* add test for gradient descent

* Docstrings improvements

* Add See Also and minor corrections

* add idx initialisation for all algorithms.

* fix merge error

* fix typo

Co-authored-by: Samuel Farrens <[email protected]>
Co-authored-by: Chaithya G R <[email protected]>
Co-authored-by: chaithyagr <[email protected]>

* started clean up for next release

* update progress

* further clean up

* additional clean up

* cleaned up link to logo

…velop

…velop

* add SingularValueThreshold

This Method provides 10x faster SVT estimation than the LowRankMatrix Operator.

* linting

* add test for fast computation.

* flake8 compliance

* Ignore DAR000 Error.

* Update modopt/signal/svd.py

tuples in docstring

Co-authored-by: Samuel Farrens <[email protected]>

* Update modopt/signal/svd.py

typo

Co-authored-by: Samuel Farrens <[email protected]>

* Update modopt/opt/proximity.py

typo

Co-authored-by: Samuel Farrens <[email protected]>

* update docstring

* fix isort

* Update modopt/signal/svd.py

Co-authored-by: Samuel Farrens <[email protected]>

* Update modopt/signal/svd.py

Co-authored-by: Samuel Farrens <[email protected]>

* run isort

Co-authored-by: Samuel Farrens <[email protected]>

* [lint] pydocstyle compliance.

* use pytest-pydocstyle

* Correct the norm update for Power Method

x_new should be divided by its norm, not by x_old_norm.

* fix test value

We are testing for eigen value of Identity. It should be one.

* fix WPS350

* fix test value for unconverged case

Co-authored-by: Samuel Farrens <[email protected]>

* switch from progressbar to tqdm.

The progress bar can be provided externally for nested usage.

* exposes the progress bar argument.

* Child classes better have to implement these.

(my linter was complaining)

* update docs for progress bar using tqdm.

* fix WPS errors

* drop progressbar requirement, add tqdm.

* [lint] disable warning for non implemented function.

* simplify progbar check and argument passthrough

Remote progressbar, use tqdm.

* add small help for the metric argument.

* RST validation

* use single quote

* use double backticks.

Co-authored-by: Samuel Farrens <[email protected]>

Based on Goldstein2014

* update python version support.

* use string for CI.

* remove flake8 and wemake-python-styleguide

This anticipates the change to black formatting.

* remove wps checks

* apparently conda does not support 3.11 for now

* remove all linting testing.

* fix np.int warning/error

* fix dtype error

* fix precision for doctest

* added black and isort support

* Update python version in README

* add 3.7 for test  back

* don't test 3.10 twice

* add MatrixOperator.

* move base test to pytest.

* [fixme] remove flake8 and emoji config.

* rewrite test_math module using pytest.

* use fail/skipparam helper function.

* generalize usage of failparam

* refactor test_signal.

* refactor test_signal, the end.

* lint

* fix missing parameter.

* add dummy object test helper.

* rewrite test for cost and gradients.

* show missing lines in coverage reports

* rewrite of proximity operators testing.

* add fail  low rank method.

* add cases for algorithms test

* add algorithm test.

* add pytest-cases and pytest-xdists support.

* add support for testing metrics.

* improve base module coverage.

* test for wrong mask in metric module.

* add docstring.

* update email adress and authors field.

* 100% coverage for transform module.

* move linear operator to class

* update docstring.

* paramet(e)rization.

* update docstring.

* improve test_helper module.

* raises should be specified for each failparam call.

* encapsulate module's test in classes.

* skip test if sklearn is not installed.

* pin pydocstyle

Fix Gaussian kernel issue

* Initialize the example module.

* do not export the assert statements.

* add matplotlib as requirement.

* add support for sphinx-gallery

* Update modopt/examples/README.rst

Co-authored-by: Samuel Farrens <[email protected]>

* Update modopt/examples/__init__.py

Co-authored-by: Samuel Farrens <[email protected]>

* Update modopt/examples/conftest.py

Co-authored-by: Samuel Farrens <[email protected]>

* Update modopt/examples/example_lasso_forward_backward.py

Co-authored-by: Samuel Farrens <[email protected]>

* Update modopt/examples/example_lasso_forward_backward.py

Co-authored-by: Samuel Farrens <[email protected]>

* ignore auto_example folder

* doc formatting.

* add pogm and basic comparison.

* fix: add matplotlib for the plotting in examples scripts.

* fix: add matplotlib for basic ci too.

* ci: run pytest with xdist for faster testing

---------

Co-authored-by: Samuel Farrens <[email protected]>

Refs: #290

fix #290

Add support for ADMM

Add Wavelet support