Add flake8 in github actions and fix issues

BlueBrain · Oct 10, 2024 · 533687c · 533687c
1 parent f85b27a
commit 533687c
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Showing 3 changed files with 6 additions and 1 deletion.
diff --git a/.github/workflows/simulation_test.yml b/.github/workflows/simulation_test.yml
@@ -237,6 +237,10 @@ jobs:
     - name: Install test dependencies
       run: |
         pip install -r tests/requirements.txt
+        pip install flake8 flake8-pyproject
+
+    - name: Run flake8
+      run: flake8 .
 
     - name: test-unit
       run: |

diff --git a/tests/integration-e2e/test_reports.py b/tests/integration-e2e/test_reports.py
@@ -122,6 +122,7 @@ def _create_reports_config(original_config_path: Path, tmp_path: Path) -> tuple[
 
     return str(temp_config_path), str(output_dir)
 
+
 @pytest.mark.slow
 def test_v5_sonata_reports(tmp_path):
     import numpy.testing as npt

diff --git a/tests/scientific/test_lfp.py b/tests/scientific/test_lfp.py
@@ -140,7 +140,7 @@ def _read_sonata_lfp_file(lfp_file):
     return node_ids, data
 
 
-def _create_lfp_config(original_config_path: Path, lfp_file: Path, tmp_path: Path) -> tuple[Path, Path]:
+def _create_lfp_config(original_config_path, lfp_file, tmp_path):
     """
     Create a modified lfp configuration file in a temporary directory.
     """