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Cell Markers Ontology

Description: An ontology of cell type markers.

This ontology integrates cell type markers for cells in the Cell Ontology from various sources along with details of marker context (anatomical context, assay), confidence (where available) and provenance.

This ontology is not currently registered with or approved by the OBO foundry. It is intended, primarily, as a source for the content for the CL knowledge graph.

Versions

Stable release versions

The latest version of the ontology can always be found under the latest tag on this repository. Future versions may be available via the OBO foundry PURL http://purl.obolibrary.org/obo/clm.owl, if approval is sought and granted.

Editors' version

This ontology is automatically built from templates and source data files (tsvs). While this repository does contain an editor's file, src/ontology/clm-edit.owl content should be added via depositing/editing data files or improvements to templates.

Contact

Please use this GitHub repository's Issue tracker to request new content or report errors or specific concerns related to the ontology.

Acknowledgements

This ontology repository was created using the Ontology Development Kit (ODK).

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