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java.lang.RuntimeException: Error while encoding: java.lang.ArrayIndexOutOfBoundsException: 1 #305

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yuanwuab opened this issue Oct 11, 2019 · 0 comments

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@yuanwuab
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I got an error when I was trying to join two datasets which are from postgres and csv file
the error message is like this:
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 14.0 failed 1 times, most recent failure: Lost task 0.0 in stage 14.0 (TID 14, localhost, executor driver): java.lang.RuntimeException: Error while encoding: java.lang.ArrayIndexOutOfBoundsException: 1
staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true]), 0, targetString), StringType), true, false) AS targetString#205
staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true]), 1, deviceName), StringType), true, false) AS deviceName#206
staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true]), 2, alarmDetectionCode), StringType), true, false) AS alarmDetectionCode#207
at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.toRow(ExpressionEncoder.scala:292)
at org.apache.spark.sql.SparkSession$$anonfun$4.apply(SparkSession.scala:593)
at org.apache.spark.sql.SparkSession$$anonfun$4.apply(SparkSession.scala:593)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:410)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:410)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:410)
at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:149)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:99)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:55)
at org.apache.spark.scheduler.Task.run(Task.scala:121)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$11.apply(Executor.scala:407)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:413)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.ArrayIndexOutOfBoundsException: 1
at org.apache.spark.sql.catalyst.expressions.GenericRow.get(rows.scala:174)
at org.apache.spark.sql.Row$class.isNullAt(Row.scala:191)
at org.apache.spark.sql.catalyst.expressions.GenericRow.isNullAt(rows.scala:166)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.StaticInvoke_1$(generated.java:94)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(generated.java:36)
at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.toRow(ExpressionEncoder.scala:289)
... 15 more

Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1890)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1878)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1877)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1877)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:929)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:929)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:929)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2111)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2060)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2049)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:740)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2073)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2094)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2113)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:365)
at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:38)
at org.apache.spark.sql.Dataset.org$apache$spark$sql$Dataset$$collectFromPlan(Dataset.scala:3383)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2544)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2544)
at org.apache.spark.sql.Dataset$$anonfun$53.apply(Dataset.scala:3364)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3363)
at org.apache.spark.sql.Dataset.head(Dataset.scala:2544)
at org.apache.spark.sql.Dataset.take(Dataset.scala:2758)
at org.apache.spark.sql.Dataset.getRows(Dataset.scala:254)
at org.apache.spark.sql.Dataset.showString(Dataset.scala:291)
at org.apache.spark.sql.Dataset.show(Dataset.scala:745)
at org.apache.spark.sql.Dataset.show(Dataset.scala:704)
at org.apache.spark.sql.Dataset.show(Dataset.scala:713)
at jp.co.nec.necdas.commons.customize.service.dataset.ALMTriggerProcessLogic.process(ALMTriggerProcessLogic.java:295)
at jp.co.nec.necdas.commons.customize.service.dataset.ALMTriggerProcessLogic.execute(ALMTriggerProcessLogic.java:179)
at jp.co.nec.necdas.commons.customize.service.dataset.ALMTriggerProcessLogic.execute(ALMTriggerProcessLogic.java:1)
at jp.co.nec.necdas.commons.service.StandardExecutorService.execute(StandardExecutorService.java:65)
at jp.co.nec.necdas.commons.service.StandardExecutorServiceTest.testExecute(StandardExecutorServiceTest.java:26)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:50)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:12)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:47)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:17)
at org.springframework.test.context.junit4.statements.RunBeforeTestExecutionCallbacks.evaluate(RunBeforeTestExecutionCallbacks.java:73)
at org.springframework.test.context.junit4.statements.RunAfterTestExecutionCallbacks.evaluate(RunAfterTestExecutionCallbacks.java:83)
at org.springframework.test.context.junit4.statements.RunBeforeTestMethodCallbacks.evaluate(RunBeforeTestMethodCallbacks.java:75)
at org.springframework.test.context.junit4.statements.RunAfterTestMethodCallbacks.evaluate(RunAfterTestMethodCallbacks.java:86)
at org.springframework.test.context.junit4.statements.SpringRepeat.evaluate(SpringRepeat.java:84)
at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:325)
at org.springframework.test.context.junit4.SpringJUnit4ClassRunner.runChild(SpringJUnit4ClassRunner.java:251)
at org.springframework.test.context.junit4.SpringJUnit4ClassRunner.runChild(SpringJUnit4ClassRunner.java:97)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:290)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:71)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:288)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:58)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:268)
at org.springframework.test.context.junit4.statements.RunBeforeTestClassCallbacks.evaluate(RunBeforeTestClassCallbacks.java:61)
at org.springframework.test.context.junit4.statements.RunAfterTestClassCallbacks.evaluate(RunAfterTestClassCallbacks.java:70)
at org.junit.runners.ParentRunner.run(ParentRunner.java:363)
at org.springframework.test.context.junit4.SpringJUnit4ClassRunner.run(SpringJUnit4ClassRunner.java:190)
at org.eclipse.jdt.internal.junit4.runner.JUnit4TestReference.run(JUnit4TestReference.java:86)
at org.eclipse.jdt.internal.junit.runner.TestExecution.run(TestExecution.java:38)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:538)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:760)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.run(RemoteTestRunner.java:460)
at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.main(RemoteTestRunner.java:206)
Caused by: java.lang.RuntimeException: Error while encoding: java.lang.ArrayIndexOutOfBoundsException: 1
staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true]), 0, targetString), StringType), true, false) AS targetString#205
staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true]), 1, deviceName), StringType), true, false) AS deviceName#206
staticinvoke(class org.apache.spark.unsafe.types.UTF8String, StringType, fromString, validateexternaltype(getexternalrowfield(assertnotnull(input[0, org.apache.spark.sql.Row, true]), 2, alarmDetectionCode), StringType), true, false) AS alarmDetectionCode#207
at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.toRow(ExpressionEncoder.scala:292)
at org.apache.spark.sql.SparkSession$$anonfun$4.apply(SparkSession.scala:593)
at org.apache.spark.sql.SparkSession$$anonfun$4.apply(SparkSession.scala:593)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:410)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:410)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:410)
at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:149)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:99)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:55)
at org.apache.spark.scheduler.Task.run(Task.scala:121)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$11.apply(Executor.scala:407)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:413)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.ArrayIndexOutOfBoundsException: 1
at org.apache.spark.sql.catalyst.expressions.GenericRow.get(rows.scala:174)
at org.apache.spark.sql.Row$class.isNullAt(Row.scala:191)
at org.apache.spark.sql.catalyst.expressions.GenericRow.isNullAt(rows.scala:166)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.StaticInvoke_1$(generated.java:94)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$SpecificUnsafeProjection.apply(generated.java:36)
at org.apache.spark.sql.catalyst.encoders.ExpressionEncoder.toRow(ExpressionEncoder.scala:289)
... 15 more

It looked like mismatch happened when spark application was joining two dataset
with different schema , but I don't know how it happened.

My java code:
Dataset result = null;
result = deviceInfoDataset.join(searchInfo,deviceInfoDataset.col("deviceName").equalTo(searchInfo.col("deviceName")));
result.show();

Dataset schema:
device
+--------+----------+----------+
|ctgry_cd|deviceInfo|deviceName|
+--------+----------+----------+

searchinfo

+------------+----------+------------------+
|targetString|deviceName|alarmDetectionCode|
+------------+----------+------------------+

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