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setup.py
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setup.py
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import os
from setuptools import setup, find_packages
__dir__ = os.path.dirname(__file__)
with open(
os.path.join(__dir__, 'pyproteome', 'version.py')
) as f:
__version__ = '0.0.0'
for line in f:
if '#' in line:
line = line[:line.index('#')]
if not line.startswith('version ='):
continue
__version__ = line.split('=')[1].strip().strip('\'').strip('\"')
REQUIREMENTS = [
'adjustText>=0.7.3',
'fastcluster>=1.1.25',
'goatools>=0.9',
'ipython>=5.4.1',
'matplotlib>=3.0',
'numpy>=1.17',
'numpydoc>=0.9',
'pandas>=0.23',
'pingouin>=0.3',
'scikit-learn>=0.21',
'scipy>=1.3.0',
'seaborn>=0.9.0',
'uniprot==1.3',
'xlrd>=1.2',
'xlwt>=1.3',
'xlsxwriter>=1.2',
]
if __name__ == '__main__':
setup(
name='pyproteome',
version=__version__,
description='Package for managing proteomics data',
url='https://github.com/white-lab/pyproteome',
author='Nader Morshed',
author_email='[email protected]',
license='BSD-2-Clause',
packages=find_packages(exclude=['*.tests', 'tests']),
install_requires=REQUIREMENTS,
extras_require={
'photon': [
'photon_ptm '
'@ http://github.com/jdrudolph/photon/archive/master.zip',
'perseuspy>=0.3.8',
],
'genemap': [
'genemap '
'@ http://github.com/naderm/genemap/archive/master.zip',
],
},
classifiers=[
'License :: OSI Approved :: BSD License',
'Natural Language :: English',
'Operating System :: OS Independent',
'Programming Language :: Python :: 2',
'Programming Language :: Python :: 2.7',
'Programming Language :: Python :: 3',
'Programming Language :: Python :: 3.6',
'Programming Language :: Python :: 3.7',
'Programming Language :: Python :: 3.8',
'Topic :: Scientific/Engineering',
],
test_suite='tests',
)