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CONTRIBUTING.md

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Scope

Please follow these guidelines:

  • This repository is only meant for sharing studies with COVID-19 RNA-Seq datasets i.e. cell lines or tissues infected with COVID-19.
  • You are welcome to contribute to contribute to this repository, please fork this repository, make changes and then send a pull request. Please see steps below.
  • If you want me to add/edit information, please open a new issue and describe your changes. If you are proposing to add new dataset, please provide working links to the data and the publications.

Contributing

  • Please ensure that the dataset you want to contribute is not already present in the README table.
  • All the data is entered through yaml files.
  1. Fork this repository to your GitHub account OR directly edit yaml files in the data directory on GitHub and send a pull request.
  2. Clone your fork to local drive using git clone. Before making changes, make sure current branch is up to date with original:
git checkout master
git pull upstream master
  1. Create a new yaml file under the data directory, name it after your user id. You may also choose to edit an existing yaml file.
  2. Use the yaml format template to enter RNA-Seq dataset or resource information. For help, take a look at existing yaml files.
  3. Push the changes to your repo and send a pull request through GitHub:
git push
  1. Changes will be automatically reflected in README.md upon merging the pull request.

NOTE: Please make sure all links to data are correct and working

Cloning this repository

To clone this repository please use the following command:

git clone https://github.com/urmi-21/COVID-19-RNA-Seq-datasets.git