diff --git a/.eslintignore b/.eslintignore new file mode 100644 index 000000000..5e8e7e0b6 --- /dev/null +++ b/.eslintignore @@ -0,0 +1 @@ +**/*.json diff --git a/.github/workflows/stale.yml b/.github/workflows/stale.yml new file mode 100644 index 000000000..7bbc0505b --- /dev/null +++ b/.github/workflows/stale.yml @@ -0,0 +1,19 @@ +name: Mark stale issues and pull requests + +on: + schedule: + - cron: "0 0 * * *" + +jobs: + stale: + + runs-on: ubuntu-latest + + steps: + - uses: actions/stale@v1 + with: + repo-token: ${{ secrets.GITHUB_TOKEN }} + stale-issue-message: 'Stale issue message' + stale-pr-message: 'Stale pull request message' + stale-issue-label: 'no-issue-activity' + stale-pr-label: 'no-pr-activity' diff --git a/.travis.yml b/.travis.yml index 2b590b6cd..968d2b51f 100644 --- a/.travis.yml +++ b/.travis.yml @@ -5,8 +5,8 @@ git: node_js: - 8 - - 10 - - 12 +# - 10 +# - 12 script: - npm run-script lint diff --git a/package-lock.json b/package-lock.json index 5881a10ab..61d32b3f2 100644 --- a/package-lock.json +++ b/package-lock.json @@ -1,6 +1,6 @@ { "name": "ucsc-xena-geneset", - "version": "0.2.3", + "version": "0.3.0", "lockfileVersion": 1, "requires": true, "dependencies": { @@ -8,7 +8,6 @@ "version": "7.5.5", "resolved": "https://registry.npmjs.org/@babel/code-frame/-/code-frame-7.5.5.tgz", "integrity": "sha512-27d4lZoomVyo51VegxI20xZPuSHusqbQag/ztrBC7wegWoQ1nLREPVSKSW8byhTlzTKyNE4ifaTA6lCp7JjpFw==", - "dev": true, "requires": { "@babel/highlight": "^7.0.0" } @@ -79,7 +78,6 @@ "version": "7.5.0", "resolved": "https://registry.npmjs.org/@babel/highlight/-/highlight-7.5.0.tgz", "integrity": "sha512-7dV4eu9gBxoM0dAnj/BCFDW9LFU0zvTrkq0ugM7pnHEgguOEeOz1so2ZghEdzviYzQEED0r4EAgpsBChKy1TRQ==", - "dev": true, "requires": { "chalk": "^2.0.0", "esutils": "^2.0.2", @@ -311,8 +309,7 @@ "@types/normalize-package-data": { "version": "2.4.0", "resolved": "https://registry.npmjs.org/@types/normalize-package-data/-/normalize-package-data-2.4.0.tgz", - "integrity": "sha512-f5j5b/Gf71L+dbqxIpQ4Z2WlmI/mPJ0fOkGGmFgtb6sAu97EPczzbS3/tJKxmcYDj55OX6ssqwDAWOHIYDRDGA==", - "dev": true + "integrity": "sha512-f5j5b/Gf71L+dbqxIpQ4Z2WlmI/mPJ0fOkGGmFgtb6sAu97EPczzbS3/tJKxmcYDj55OX6ssqwDAWOHIYDRDGA==" }, "@types/stack-utils": { "version": "1.0.1", @@ -739,7 +736,6 @@ "version": "1.0.10", "resolved": "https://registry.npmjs.org/argparse/-/argparse-1.0.10.tgz", "integrity": "sha512-o5Roy6tNG4SL/FOkCAN6RzjiakZS25RLYFrcMttJqbdd8BWrnA+fGz57iN5Pb06pvBGvl5gQ0B48dJlslXvoTg==", - "dev": true, "requires": { "sprintf-js": "~1.0.2" } @@ -2795,7 +2791,6 @@ "version": "2.0.0", "resolved": "https://registry.npmjs.org/caller-callsite/-/caller-callsite-2.0.0.tgz", "integrity": "sha1-hH4PzgoiN1CpoCfFSzNzGtMVQTQ=", - "dev": true, "requires": { "callsites": "^2.0.0" }, @@ -2803,8 +2798,7 @@ "callsites": { "version": "2.0.0", "resolved": "https://registry.npmjs.org/callsites/-/callsites-2.0.0.tgz", - "integrity": "sha1-BuuE8A7qQT2oav/vrL/7Ngk7PFA=", - "dev": true + "integrity": "sha1-BuuE8A7qQT2oav/vrL/7Ngk7PFA=" } } }, @@ -2812,7 +2806,6 @@ "version": "2.0.0", "resolved": "https://registry.npmjs.org/caller-path/-/caller-path-2.0.0.tgz", "integrity": "sha1-Ro+DBE42mrIBD6xfBs7uFbsssfQ=", - "dev": true, "requires": { "caller-callsite": "^2.0.0" } @@ -2944,8 +2937,7 @@ "ci-info": { "version": "2.0.0", "resolved": "https://registry.npmjs.org/ci-info/-/ci-info-2.0.0.tgz", - "integrity": "sha512-5tK7EtrZ0N+OLFMthtqOj4fI2Jeb88C4CAZPu25LDVUgXJ0A3Js4PMGqrn0JU1W0Mh1/Z8wZzYPxqUrXeBboCQ==", - "dev": true + "integrity": "sha512-5tK7EtrZ0N+OLFMthtqOj4fI2Jeb88C4CAZPu25LDVUgXJ0A3Js4PMGqrn0JU1W0Mh1/Z8wZzYPxqUrXeBboCQ==" }, "cipher-base": { "version": "1.0.4", @@ -3455,7 +3447,6 @@ "version": "6.0.5", "resolved": "https://registry.npmjs.org/cross-spawn/-/cross-spawn-6.0.5.tgz", "integrity": "sha512-eTVLrBSt7fjbDygz805pMnstIs2VTBNkRm0qxZd+M7A5XDdxVRWO5MxGBXZhjY4cqLYLdtrGqRf8mBPmzwSpWQ==", - "dev": true, "requires": { "nice-try": "^1.0.4", "path-key": "^2.0.1", @@ -3941,8 +3932,7 @@ "decode-uri-component": { "version": "0.2.0", "resolved": "https://registry.npmjs.org/decode-uri-component/-/decode-uri-component-0.2.0.tgz", - "integrity": "sha1-6zkTMzRYd1y4TNGh+uBiEGu4dUU=", - "dev": true + "integrity": "sha1-6zkTMzRYd1y4TNGh+uBiEGu4dUU=" }, "deep-equal": { "version": "1.0.1", @@ -4426,7 +4416,6 @@ "version": "1.4.1", "resolved": "https://registry.npmjs.org/end-of-stream/-/end-of-stream-1.4.1.tgz", "integrity": "sha512-1MkrZNvWTKCaigbn+W15elq2BB/L22nqrSY5DKlo3X6+vclJm8Bb5djXJBmEX6fS3+zCh/F4VBK5Z2KxJt4s2Q==", - "dev": true, "requires": { "once": "^1.4.0" } @@ -4556,7 +4545,6 @@ "version": "1.3.2", "resolved": "https://registry.npmjs.org/error-ex/-/error-ex-1.3.2.tgz", "integrity": "sha512-7dFHNmqeFSEt2ZBsCriorKnn3Z2pj+fd9kmI6QoWw4//DL+icEBfc0U7qJCisqrTsKTjw4fNFy2pW9OqStD84g==", - "dev": true, "requires": { "is-arrayish": "^0.2.1" }, @@ -4564,8 +4552,7 @@ "is-arrayish": { "version": "0.2.1", "resolved": "https://registry.npmjs.org/is-arrayish/-/is-arrayish-0.2.1.tgz", - "integrity": "sha1-d8mYQFJ6qOyxqLppe4BkWnqSap0=", - "dev": true + "integrity": "sha1-d8mYQFJ6qOyxqLppe4BkWnqSap0=" } } }, @@ -5939,25 +5926,29 @@ "dependencies": { "abbrev": { "version": "1.1.1", - "bundled": true, + "resolved": false, + "integrity": "sha512-nne9/IiQ/hzIhY6pdDnbBtz7DjPTKrY00P/zvPSm5pOFkl6xuGrGnXn/VtTNNfNtAfZ9/1RtehkszU9qcTii0Q==", "dev": true, "optional": true }, "ansi-regex": { "version": "2.1.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-w7M6te42DYbg5ijwRorn7yfWVN8=", "dev": true, "optional": true }, "aproba": { "version": "1.2.0", - "bundled": true, + "resolved": false, + "integrity": "sha512-Y9J6ZjXtoYh8RnXVCMOU/ttDmk1aBjunq9vO0ta5x85WDQiQfUF9sIPBITdbiiIVcBo03Hi3jMxigBtsddlXRw==", "dev": true, "optional": true }, "are-we-there-yet": { "version": "1.1.5", - "bundled": true, + "resolved": false, + "integrity": "sha512-5hYdAkZlcG8tOLujVDTgCT+uPX0VnpAH28gWsLfzpXYm7wP6mp5Q/gYyR7YQ0cKVJcXJnl3j2kpBan13PtQf6w==", "dev": true, "optional": true, "requires": { @@ -5967,13 +5958,15 @@ }, "balanced-match": { "version": "1.0.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-ibTRmasr7kneFk6gK4nORi1xt2c=", "dev": true, "optional": true }, "brace-expansion": { "version": "1.1.11", - "bundled": true, + "resolved": false, + "integrity": "sha512-iCuPHDFgrHX7H2vEI/5xpz07zSHB00TpugqhmYtVmMO6518mCuRMoOYFldEBl0g187ufozdaHgWKcYFb61qGiA==", "dev": true, "optional": true, "requires": { @@ -5983,37 +5976,43 @@ }, "chownr": { "version": "1.1.1", - "bundled": true, + "resolved": false, + "integrity": "sha512-j38EvO5+LHX84jlo6h4UzmOwi0UgW61WRyPtJz4qaadK5eY3BTS5TY/S1Stc3Uk2lIM6TPevAlULiEJwie860g==", "dev": true, "optional": true }, "code-point-at": { "version": "1.1.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-DQcLTQQ6W+ozovGkDi7bPZpMz3c=", "dev": true, "optional": true }, "concat-map": { "version": "0.0.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-2Klr13/Wjfd5OnMDajug1UBdR3s=", "dev": true, "optional": true }, "console-control-strings": { "version": "1.1.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-PXz0Rk22RG6mRL9LOVB/mFEAjo4=", "dev": true, "optional": true }, "core-util-is": { "version": "1.0.2", - "bundled": true, + "resolved": false, + "integrity": "sha1-tf1UIgqivFq1eqtxQMlAdUUDwac=", "dev": true, "optional": true }, "debug": { "version": "2.6.9", - "bundled": true, + "resolved": false, + "integrity": "sha512-bC7ElrdJaJnPbAP+1EotYvqZsb3ecl5wi6Bfi6BJTUcNowp6cvspg0jXznRTKDjm/E7AdgFBVeAPVMNcKGsHMA==", "dev": true, "optional": true, "requires": { @@ -6022,25 +6021,29 @@ }, "deep-extend": { "version": "0.6.0", - "bundled": true, + "resolved": false, + "integrity": "sha512-LOHxIOaPYdHlJRtCQfDIVZtfw/ufM8+rVj649RIHzcm/vGwQRXFt6OPqIFWsm2XEMrNIEtWR64sY1LEKD2vAOA==", "dev": true, "optional": true }, "delegates": { "version": "1.0.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-hMbhWbgZBP3KWaDvRM2HDTElD5o=", "dev": true, "optional": true }, "detect-libc": { "version": "1.0.3", - "bundled": true, + "resolved": false, + "integrity": "sha1-+hN8S9aY7fVc1c0CrFWfkaTEups=", "dev": true, "optional": true }, "fs-minipass": { "version": "1.2.5", - "bundled": true, + "resolved": false, + "integrity": "sha512-JhBl0skXjUPCFH7x6x61gQxrKyXsxB5gcgePLZCwfyCGGsTISMoIeObbrvVeP6Xmyaudw4TT43qV2Gz+iyd2oQ==", "dev": true, "optional": true, "requires": { @@ -6049,13 +6052,15 @@ }, "fs.realpath": { "version": "1.0.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-FQStJSMVjKpA20onh8sBQRmU6k8=", "dev": true, "optional": true }, "gauge": { "version": "2.7.4", - "bundled": true, + "resolved": false, + "integrity": "sha1-LANAXHU4w51+s3sxcCLjJfsBi/c=", "dev": true, "optional": true, "requires": { @@ -6071,7 +6076,8 @@ }, "glob": { "version": "7.1.3", - "bundled": true, + "resolved": false, + "integrity": "sha512-vcfuiIxogLV4DlGBHIUOwI0IbrJ8HWPc4MU7HzviGeNho/UJDfi6B5p3sHeWIQ0KGIU0Jpxi5ZHxemQfLkkAwQ==", "dev": true, "optional": true, "requires": { @@ -6085,13 +6091,15 @@ }, "has-unicode": { "version": "2.0.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-4Ob+aijPUROIVeCG0Wkedx3iqLk=", "dev": true, "optional": true }, "iconv-lite": { "version": "0.4.24", - "bundled": true, + "resolved": false, + "integrity": "sha512-v3MXnZAcvnywkTUEZomIActle7RXXeedOR31wwl7VlyoXO4Qi9arvSenNQWne1TcRwhCL1HwLI21bEqdpj8/rA==", "dev": true, "optional": true, "requires": { @@ -6100,7 +6108,8 @@ }, "ignore-walk": { "version": "3.0.1", - "bundled": true, + "resolved": false, + "integrity": "sha512-DTVlMx3IYPe0/JJcYP7Gxg7ttZZu3IInhuEhbchuqneY9wWe5Ojy2mXLBaQFUQmo0AW2r3qG7m1mg86js+gnlQ==", "dev": true, "optional": true, "requires": { @@ -6109,7 +6118,8 @@ }, "inflight": { "version": "1.0.6", - "bundled": true, + "resolved": false, + "integrity": "sha1-Sb1jMdfQLQwJvJEKEHW6gWW1bfk=", "dev": true, "optional": true, "requires": { @@ -6119,19 +6129,22 @@ }, "inherits": { "version": "2.0.3", - "bundled": true, + "resolved": false, + "integrity": "sha1-Yzwsg+PaQqUC9SRmAiSA9CCCYd4=", "dev": true, "optional": true }, "ini": { "version": "1.3.5", - "bundled": true, + "resolved": false, + "integrity": "sha512-RZY5huIKCMRWDUqZlEi72f/lmXKMvuszcMBduliQ3nnWbx9X/ZBQO7DijMEYS9EhHBb2qacRUMtC7svLwe0lcw==", "dev": true, "optional": true }, "is-fullwidth-code-point": { "version": "1.0.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-754xOG8DGn8NZDr4L95QxFfvAMs=", "dev": true, "optional": true, "requires": { @@ -6140,13 +6153,15 @@ }, "isarray": { "version": "1.0.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-u5NdSFgsuhaMBoNJV6VKPgcSTxE=", "dev": true, "optional": true }, "minimatch": { "version": "3.0.4", - "bundled": true, + "resolved": false, + "integrity": "sha512-yJHVQEhyqPLUTgt9B83PXu6W3rx4MvvHvSUvToogpwoGDOUQ+yDrR0HRot+yOCdCO7u4hX3pWft6kWBBcqh0UA==", "dev": true, "optional": true, "requires": { @@ -6155,13 +6170,15 @@ }, "minimist": { "version": "0.0.8", - "bundled": true, + "resolved": false, + "integrity": "sha1-hX/Kv8M5fSYluCKCYuhqp6ARsF0=", "dev": true, "optional": true }, "minipass": { "version": "2.3.5", - "bundled": true, + "resolved": false, + "integrity": "sha512-Gi1W4k059gyRbyVUZQ4mEqLm0YIUiGYfvxhF6SIlk3ui1WVxMTGfGdQ2SInh3PDrRTVvPKgULkpJtT4RH10+VA==", "dev": true, "optional": true, "requires": { @@ -6171,7 +6188,8 @@ }, "minizlib": { "version": "1.2.1", - "bundled": true, + "resolved": false, + "integrity": "sha512-7+4oTUOWKg7AuL3vloEWekXY2/D20cevzsrNT2kGWm+39J9hGTCBv8VI5Pm5lXZ/o3/mdR4f8rflAPhnQb8mPA==", "dev": true, "optional": true, "requires": { @@ -6180,7 +6198,8 @@ }, "mkdirp": { "version": "0.5.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-MAV0OOrGz3+MR2fzhkjWaX11yQM=", "dev": true, "optional": true, "requires": { @@ -6189,13 +6208,15 @@ }, "ms": { "version": "2.0.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-VgiurfwAvmwpAd9fmGF4jeDVl8g=", "dev": true, "optional": true }, "needle": { "version": "2.2.4", - "bundled": true, + "resolved": false, + "integrity": "sha512-HyoqEb4wr/rsoaIDfTH2aVL9nWtQqba2/HvMv+++m8u0dz808MaagKILxtfeSN7QU7nvbQ79zk3vYOJp9zsNEA==", "dev": true, "optional": true, "requires": { @@ -6206,7 +6227,8 @@ }, "node-pre-gyp": { "version": "0.10.3", - "bundled": true, + "resolved": false, + "integrity": "sha512-d1xFs+C/IPS8Id0qPTZ4bUT8wWryfR/OzzAFxweG+uLN85oPzyo2Iw6bVlLQ/JOdgNonXLCoRyqDzDWq4iw72A==", "dev": true, "optional": true, "requires": { @@ -6224,7 +6246,8 @@ }, "nopt": { "version": "4.0.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-0NRoWv1UFRk8jHUFYC0NF81kR00=", "dev": true, "optional": true, "requires": { @@ -6234,13 +6257,15 @@ }, "npm-bundled": { "version": "1.0.5", - "bundled": true, + "resolved": false, + "integrity": "sha512-m/e6jgWu8/v5niCUKQi9qQl8QdeEduFA96xHDDzFGqly0OOjI7c+60KM/2sppfnUU9JJagf+zs+yGhqSOFj71g==", "dev": true, "optional": true }, "npm-packlist": { "version": "1.2.0", - "bundled": true, + "resolved": false, + "integrity": "sha512-7Mni4Z8Xkx0/oegoqlcao/JpPCPEMtUvsmB0q7mgvlMinykJLSRTYuFqoQLYgGY8biuxIeiHO+QNJKbCfljewQ==", "dev": true, "optional": true, "requires": { @@ -6250,7 +6275,8 @@ }, "npmlog": { "version": "4.1.2", - "bundled": true, + "resolved": false, + "integrity": "sha512-2uUqazuKlTaSI/dC8AzicUck7+IrEaOnN/e0jd3Xtt1KcGpwx30v50mL7oPyr/h9bL3E4aZccVwpwP+5W9Vjkg==", "dev": true, "optional": true, "requires": { @@ -6262,19 +6288,22 @@ }, "number-is-nan": { "version": "1.0.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-CXtgK1NCKlIsGvuHkDGDNpQaAR0=", "dev": true, "optional": true }, "object-assign": { "version": "4.1.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-IQmtx5ZYh8/AXLvUQsrIv7s2CGM=", "dev": true, "optional": true }, "once": { "version": "1.4.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-WDsap3WWHUsROsF9nFC6753Xa9E=", "dev": true, "optional": true, "requires": { @@ -6283,19 +6312,22 @@ }, "os-homedir": { "version": "1.0.2", - "bundled": true, + "resolved": false, + "integrity": "sha1-/7xJiDNuDoM94MFox+8VISGqf7M=", "dev": true, "optional": true }, "os-tmpdir": { "version": "1.0.2", - "bundled": true, + "resolved": false, + "integrity": "sha1-u+Z0BseaqFxc/sdm/lc0VV36EnQ=", "dev": true, "optional": true }, "osenv": { "version": "0.1.5", - "bundled": true, + "resolved": false, + "integrity": "sha512-0CWcCECdMVc2Rw3U5w9ZjqX6ga6ubk1xDVKxtBQPK7wis/0F2r9T6k4ydGYhecl7YUBxBVxhL5oisPsNxAPe2g==", "dev": true, "optional": true, "requires": { @@ -6305,19 +6337,22 @@ }, "path-is-absolute": { "version": "1.0.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-F0uSaHNVNP+8es5r9TpanhtcX18=", "dev": true, "optional": true }, "process-nextick-args": { "version": "2.0.0", - "bundled": true, + "resolved": false, + "integrity": "sha512-MtEC1TqN0EU5nephaJ4rAtThHtC86dNN9qCuEhtshvpVBkAW5ZO7BASN9REnF9eoXGcRub+pFuKEpOHE+HbEMw==", "dev": true, "optional": true }, "rc": { "version": "1.2.8", - "bundled": true, + "resolved": false, + "integrity": "sha512-y3bGgqKj3QBdxLbLkomlohkvsA8gdAiUQlSBJnBhfn+BPxg4bc62d8TcBW15wavDfgexCgccckhcZvywyQYPOw==", "dev": true, "optional": true, "requires": { @@ -6329,7 +6364,8 @@ "dependencies": { "minimist": { "version": "1.2.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-o1AIsg9BOD7sH7kU9M1d95omQoQ=", "dev": true, "optional": true } @@ -6337,7 +6373,8 @@ }, "readable-stream": { "version": "2.3.6", - "bundled": true, + "resolved": false, + "integrity": "sha512-tQtKA9WIAhBF3+VLAseyMqZeBjW0AHJoxOtYqSUZNJxauErmLbVm2FW1y+J/YA9dUrAC39ITejlZWhVIwawkKw==", "dev": true, "optional": true, "requires": { @@ -6352,7 +6389,8 @@ }, "rimraf": { "version": "2.6.3", - "bundled": true, + "resolved": false, + "integrity": "sha512-mwqeW5XsA2qAejG46gYdENaxXjx9onRNCfn7L0duuP4hCuTIi/QO7PDK07KJfp1d+izWPrzEJDcSqBa0OZQriA==", "dev": true, "optional": true, "requires": { @@ -6361,43 +6399,50 @@ }, "safe-buffer": { "version": "5.1.2", - "bundled": true, + "resolved": false, + "integrity": "sha512-Gd2UZBJDkXlY7GbJxfsE8/nvKkUEU1G38c1siN6QP6a9PT9MmHB8GnpscSmMJSoF8LOIrt8ud/wPtojys4G6+g==", "dev": true, "optional": true }, "safer-buffer": { "version": "2.1.2", - "bundled": true, + "resolved": false, + "integrity": "sha512-YZo3K82SD7Riyi0E1EQPojLz7kpepnSQI9IyPbHHg1XXXevb5dJI7tpyN2ADxGcQbHG7vcyRHk0cbwqcQriUtg==", "dev": true, "optional": true }, "sax": { "version": "1.2.4", - "bundled": true, + "resolved": false, + "integrity": "sha512-NqVDv9TpANUjFm0N8uM5GxL36UgKi9/atZw+x7YFnQ8ckwFGKrl4xX4yWtrey3UJm5nP1kUbnYgLopqWNSRhWw==", "dev": true, "optional": true }, "semver": { "version": "5.6.0", - "bundled": true, + "resolved": false, + "integrity": "sha512-RS9R6R35NYgQn++fkDWaOmqGoj4Ek9gGs+DPxNUZKuwE183xjJroKvyo1IzVFeXvUrvmALy6FWD5xrdJT25gMg==", "dev": true, "optional": true }, "set-blocking": { "version": "2.0.0", - "bundled": true, + "resolved": false, + "integrity": "sha1-BF+XgtARrppoA93TgrJDkrPYkPc=", "dev": true, "optional": true }, "signal-exit": { "version": "3.0.2", - "bundled": true, + "resolved": false, + "integrity": "sha1-tf3AjxKH6hF4Yo5BXiUTK3NkbG0=", "dev": true, "optional": true }, "string-width": { "version": "1.0.2", - "bundled": true, + "resolved": false, + "integrity": "sha1-EYvfW4zcUaKn5w0hHgfisLmxB9M=", "dev": true, "optional": true, "requires": { @@ -6408,7 +6453,8 @@ }, "string_decoder": { "version": "1.1.1", - "bundled": true, + "resolved": false, + "integrity": "sha512-n/ShnvDi6FHbbVfviro+WojiFzv+s8MPMHBczVePfUpDJLwoLT0ht1l4YwBCbi8pJAveEEdnkHyPyTP/mzRfwg==", "dev": true, "optional": true, "requires": { @@ -6417,7 +6463,8 @@ }, "strip-ansi": { "version": "3.0.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-ajhfuIU9lS1f8F0Oiq+UJ43GPc8=", "dev": true, "optional": true, "requires": { @@ -6426,13 +6473,15 @@ }, "strip-json-comments": { "version": "2.0.1", - "bundled": true, + "resolved": false, + "integrity": "sha1-PFMZQukIwml8DsNEhYwobHygpgo=", "dev": true, "optional": true }, "tar": { "version": "4.4.8", - "bundled": true, + "resolved": false, + "integrity": "sha512-LzHF64s5chPQQS0IYBn9IN5h3i98c12bo4NCO7e0sGM2llXQ3p2FGC5sdENN4cTW48O915Sh+x+EXx7XW96xYQ==", "dev": true, "optional": true, "requires": { @@ -6447,13 +6496,15 @@ }, "util-deprecate": { "version": "1.0.2", - "bundled": true, + "resolved": false, + "integrity": "sha1-RQ1Nyfpw3nMnYvvS1KKJgUGaDM8=", "dev": true, "optional": true }, "wide-align": { "version": "1.1.3", - "bundled": true, + "resolved": false, + "integrity": "sha512-QGkOQc8XL6Bt5PwnsExKBPuMKBxnGxWWW3fU55Xt4feHozMUhdUMaBCk290qpm/wG5u/RSKzwdAC4i51YigihA==", "dev": true, "optional": true, "requires": { @@ -6462,13 +6513,15 @@ }, "wrappy": { "version": "1.0.2", - "bundled": true, + "resolved": false, + "integrity": "sha1-tSQ9jz7BqjXxNkYFvA0QNuMKtp8=", "dev": true, "optional": true }, "yallist": { "version": "3.0.3", - "bundled": true, + "resolved": false, + "integrity": "sha512-S+Zk8DEWE6oKpV+vI3qWkaK+jSbIK86pCwe2IF/xwIpQ8jEuxpw9NyaGjmp9+BoJv5FV2piqCDcoCtStppiq2A==", "dev": true, "optional": true } @@ -6947,8 +7000,7 @@ "hosted-git-info": { "version": "2.7.1", "resolved": "https://registry.npmjs.org/hosted-git-info/-/hosted-git-info-2.7.1.tgz", - "integrity": "sha512-7T/BxH19zbcCTa8XkMlbK5lTo1WtgkFi3GvdWEyNuc4Vex7/9Dqbnpsf4JMydcfj9HCg4zUWFTL3Za6lapg5/w==", - "dev": true + "integrity": "sha512-7T/BxH19zbcCTa8XkMlbK5lTo1WtgkFi3GvdWEyNuc4Vex7/9Dqbnpsf4JMydcfj9HCg4zUWFTL3Za6lapg5/w==" }, "hpack.js": { "version": "2.1.6", @@ -7481,21 +7533,32 @@ "dev": true }, "https-proxy-agent": { - "version": "2.2.1", - "resolved": "https://registry.npmjs.org/https-proxy-agent/-/https-proxy-agent-2.2.1.tgz", - "integrity": "sha512-HPCTS1LW51bcyMYbxUIOO4HEOlQ1/1qRaFWcyxvwaqUS9TY88aoEuHUY33kuAh1YhVVaDQhLZsnPd+XNARWZlQ==", + "version": "2.2.3", + "resolved": "https://registry.npmjs.org/https-proxy-agent/-/https-proxy-agent-2.2.3.tgz", + "integrity": "sha512-Ytgnz23gm2DVftnzqRRz2dOXZbGd2uiajSw/95bPp6v53zPRspQjLm/AfBgqbJ2qfeRXWIOMVLpp86+/5yX39Q==", "dev": true, "optional": true, "requires": { - "agent-base": "^4.1.0", + "agent-base": "^4.3.0", "debug": "^3.1.0" + }, + "dependencies": { + "agent-base": { + "version": "4.3.0", + "resolved": "https://registry.npmjs.org/agent-base/-/agent-base-4.3.0.tgz", + "integrity": "sha512-salcGninV0nPrwpGNn4VTXBb1SOuXQBiqbrNXoeizJsHrsL6ERFM2Ne3JUSBWRE6aeNJI2ROP/WEEIDUiDe3cg==", + "dev": true, + "optional": true, + "requires": { + "es6-promisify": "^5.0.0" + } + } } }, "husky": { "version": "3.0.9", "resolved": "https://registry.npmjs.org/husky/-/husky-3.0.9.tgz", "integrity": "sha512-Yolhupm7le2/MqC1VYLk/cNmYxsSsqKkTyBhzQHhPK1jFnC89mmmNVuGtLNabjDI6Aj8UNIr0KpRNuBkiC4+sg==", - "dev": true, "requires": { "chalk": "^2.4.2", "ci-info": "^2.0.0", @@ -7514,7 +7577,6 @@ "version": "5.2.1", "resolved": "https://registry.npmjs.org/cosmiconfig/-/cosmiconfig-5.2.1.tgz", "integrity": "sha512-H65gsXo1SKjf8zmrJ67eJk8aIRKV5ff2D4uKZIBZShbhGSpEmsQOPW/SKMKYhSTrqR7ufy6RP69rPogdaPh/kA==", - "dev": true, "requires": { "import-fresh": "^2.0.0", "is-directory": "^0.3.1", @@ -7526,7 +7588,6 @@ "version": "1.0.0", "resolved": "https://registry.npmjs.org/execa/-/execa-1.0.0.tgz", "integrity": "sha512-adbxcyWV46qiHyvSp50TKt05tB4tK3HcmF7/nxfAdhnox83seTDbwnaqKO4sXRy7roHAIFqJP/Rw/AuEbX61LA==", - "dev": true, "requires": { "cross-spawn": "^6.0.0", "get-stream": "^4.0.0", @@ -7541,7 +7602,6 @@ "version": "4.1.0", "resolved": "https://registry.npmjs.org/find-up/-/find-up-4.1.0.tgz", "integrity": "sha512-PpOwAdQ/YlXQ2vj8a3h8IipDuYRi3wceVQQGYWxNINccq40Anw7BlsEXCMbt1Zt+OLA6Fq9suIpIWD0OsnISlw==", - "dev": true, "requires": { "locate-path": "^5.0.0", "path-exists": "^4.0.0" @@ -7550,14 +7610,12 @@ "get-stdin": { "version": "7.0.0", "resolved": "https://registry.npmjs.org/get-stdin/-/get-stdin-7.0.0.tgz", - "integrity": "sha512-zRKcywvrXlXsA0v0i9Io4KDRaAw7+a1ZpjRwl9Wox8PFlVCCHra7E9c4kqXCoCM9nR5tBkaTTZRBoCm60bFqTQ==", - "dev": true + "integrity": "sha512-zRKcywvrXlXsA0v0i9Io4KDRaAw7+a1ZpjRwl9Wox8PFlVCCHra7E9c4kqXCoCM9nR5tBkaTTZRBoCm60bFqTQ==" }, "get-stream": { "version": "4.1.0", "resolved": "https://registry.npmjs.org/get-stream/-/get-stream-4.1.0.tgz", "integrity": "sha512-GMat4EJ5161kIy2HevLlr4luNjBgvmj413KaQA7jt4V8B4RDsfpHk7WQ9GVqfYyyx8OS/L66Kox+rJRNklLK7w==", - "dev": true, "requires": { "pump": "^3.0.0" } @@ -7566,7 +7624,6 @@ "version": "2.0.0", "resolved": "https://registry.npmjs.org/import-fresh/-/import-fresh-2.0.0.tgz", "integrity": "sha1-2BNVwVYS04bGH53dOSLUMEgipUY=", - "dev": true, "requires": { "caller-path": "^2.0.0", "resolve-from": "^3.0.0" @@ -7576,7 +7633,6 @@ "version": "5.0.0", "resolved": "https://registry.npmjs.org/locate-path/-/locate-path-5.0.0.tgz", "integrity": "sha512-t7hw9pI+WvuwNJXwk5zVHpyhIqzg2qTlklJOf0mVxGSbe3Fp2VieZcduNYjaLDoy6p9uGpQEGWG87WpMKlNq8g==", - "dev": true, "requires": { "p-locate": "^4.1.0" } @@ -7585,7 +7641,6 @@ "version": "2.2.1", "resolved": "https://registry.npmjs.org/p-limit/-/p-limit-2.2.1.tgz", "integrity": "sha512-85Tk+90UCVWvbDavCLKPOLC9vvY8OwEX/RtKF+/1OADJMVlFfEHOiMTPVyxg7mk/dKa+ipdHm0OUkTvCpMTuwg==", - "dev": true, "requires": { "p-try": "^2.0.0" } @@ -7594,7 +7649,6 @@ "version": "4.1.0", "resolved": "https://registry.npmjs.org/p-locate/-/p-locate-4.1.0.tgz", "integrity": "sha512-R79ZZ/0wAxKGu3oYMlz8jy/kbhsNrS7SKZ7PxEHBgJ5+F2mtFW2fK2cOtBh1cHYkQsbzFV7I+EoRKe6Yt0oK7A==", - "dev": true, "requires": { "p-limit": "^2.2.0" } @@ -7602,14 +7656,12 @@ "p-try": { "version": "2.2.0", "resolved": "https://registry.npmjs.org/p-try/-/p-try-2.2.0.tgz", - "integrity": "sha512-R4nPAVTAU0B9D35/Gk3uJf/7XYbQcyohSKdvAxIRSNghFl4e71hVoGnBNQz9cWaXxO2I10KTC+3jMdvvoKw6dQ==", - "dev": true + "integrity": "sha512-R4nPAVTAU0B9D35/Gk3uJf/7XYbQcyohSKdvAxIRSNghFl4e71hVoGnBNQz9cWaXxO2I10KTC+3jMdvvoKw6dQ==" }, "parse-json": { "version": "4.0.0", "resolved": "https://registry.npmjs.org/parse-json/-/parse-json-4.0.0.tgz", "integrity": "sha1-vjX1Qlvh9/bHRxhPmKeIy5lHfuA=", - "dev": true, "requires": { "error-ex": "^1.3.1", "json-parse-better-errors": "^1.0.1" @@ -7618,14 +7670,12 @@ "path-exists": { "version": "4.0.0", "resolved": "https://registry.npmjs.org/path-exists/-/path-exists-4.0.0.tgz", - "integrity": "sha512-ak9Qy5Q7jYb2Wwcey5Fpvg2KoAc/ZIhLSLOSBmRmygPsGwkVVt0fZa0qrtMz+m6tJTAHfZQ8FnmB4MG4LWy7/w==", - "dev": true + "integrity": "sha512-ak9Qy5Q7jYb2Wwcey5Fpvg2KoAc/ZIhLSLOSBmRmygPsGwkVVt0fZa0qrtMz+m6tJTAHfZQ8FnmB4MG4LWy7/w==" }, "pkg-dir": { "version": "4.2.0", "resolved": "https://registry.npmjs.org/pkg-dir/-/pkg-dir-4.2.0.tgz", "integrity": "sha512-HRDzbaKjC+AOWVXxAU/x54COGeIv9eb+6CkDSQoNTt4XyWoIJvuPsXizxu/Fr23EiekbtZwmh1IcIG/l/a10GQ==", - "dev": true, "requires": { "find-up": "^4.0.0" } @@ -7634,7 +7684,6 @@ "version": "3.0.0", "resolved": "https://registry.npmjs.org/pump/-/pump-3.0.0.tgz", "integrity": "sha512-LwZy+p3SFs1Pytd/jYct4wpv49HiYCqd9Rlc5ZVdk0V+8Yzv6jR5Blk3TRmPL1ft69TxP0IMZGJ+WPFU2BFhww==", - "dev": true, "requires": { "end-of-stream": "^1.1.0", "once": "^1.3.1" @@ -7644,7 +7693,6 @@ "version": "5.2.0", "resolved": "https://registry.npmjs.org/read-pkg/-/read-pkg-5.2.0.tgz", "integrity": "sha512-Ug69mNOpfvKDAc2Q8DRpMjjzdtrnv9HcSMX+4VsZxD1aZ6ZzrIE7rlzXBtWTyhULSMKg076AW6WR5iZpD0JiOg==", - "dev": true, "requires": { "@types/normalize-package-data": "^2.4.0", "normalize-package-data": "^2.5.0", @@ -7656,7 +7704,6 @@ "version": "5.0.0", "resolved": "https://registry.npmjs.org/parse-json/-/parse-json-5.0.0.tgz", "integrity": "sha512-OOY5b7PAEFV0E2Fir1KOkxchnZNCdowAJgQ5NuxjpBKTRP3pQhwkrkxqQjeoKJ+fO7bCpmIZaogI4eZGDMEGOw==", - "dev": true, "requires": { "@babel/code-frame": "^7.0.0", "error-ex": "^1.3.1", @@ -7669,14 +7716,12 @@ "slash": { "version": "3.0.0", "resolved": "https://registry.npmjs.org/slash/-/slash-3.0.0.tgz", - "integrity": "sha512-g9Q1haeby36OSStwb4ntCGGGaKsaVSjQ68fBxoQcutl5fS1vuY18H3wSt3jFyFtrkx+Kz0V1G85A4MyAdDMi2Q==", - "dev": true + "integrity": "sha512-g9Q1haeby36OSStwb4ntCGGGaKsaVSjQ68fBxoQcutl5fS1vuY18H3wSt3jFyFtrkx+Kz0V1G85A4MyAdDMi2Q==" }, "type-fest": { "version": "0.6.0", "resolved": "https://registry.npmjs.org/type-fest/-/type-fest-0.6.0.tgz", - "integrity": "sha512-q+MB8nYR1KDLrgr4G5yemftpMC7/QLqVndBmEEdqzmNj5dcFOO4Oo8qlwZE3ULT3+Zim1F8Kq4cBnikNhlCMlg==", - "dev": true + "integrity": "sha512-q+MB8nYR1KDLrgr4G5yemftpMC7/QLqVndBmEEdqzmNj5dcFOO4Oo8qlwZE3ULT3+Zim1F8Kq4cBnikNhlCMlg==" } } }, @@ -8007,8 +8052,7 @@ "is-directory": { "version": "0.3.1", "resolved": "https://registry.npmjs.org/is-directory/-/is-directory-0.3.1.tgz", - "integrity": "sha1-YTObbyR1/Hcv2cnYP1yFddwVSuE=", - "dev": true + "integrity": "sha1-YTObbyR1/Hcv2cnYP1yFddwVSuE=" }, "is-dotfile": { "version": "1.0.3", @@ -8260,8 +8304,7 @@ "isexe": { "version": "2.0.0", "resolved": "https://registry.npmjs.org/isexe/-/isexe-2.0.0.tgz", - "integrity": "sha1-6PvzdNxVb/iUehDcsFctYz8s+hA=", - "dev": true + "integrity": "sha1-6PvzdNxVb/iUehDcsFctYz8s+hA=" }, "isnumeric": { "version": "0.2.0", @@ -8788,7 +8831,6 @@ "version": "3.13.1", "resolved": "https://registry.npmjs.org/js-yaml/-/js-yaml-3.13.1.tgz", "integrity": "sha512-YfbcO7jXDdyj0DGxYVSlSeQNHbD7XPWvrVWeVUujrQEoZzWJIRrCPoyk6kL6IAjAG2IolMK4T0hNUe0HOUs5Jw==", - "dev": true, "requires": { "argparse": "^1.0.7", "esprima": "^4.0.0" @@ -8797,8 +8839,7 @@ "esprima": { "version": "4.0.1", "resolved": "https://registry.npmjs.org/esprima/-/esprima-4.0.1.tgz", - "integrity": "sha512-eGuFFw7Upda+g4p+QHvnW0RyTX/SVeJBDM/gCtMARO0cLuT2HcEKnTPvhjV6aGeqrCB/sbNop0Kszm0jsaWU4A==", - "dev": true + "integrity": "sha512-eGuFFw7Upda+g4p+QHvnW0RyTX/SVeJBDM/gCtMARO0cLuT2HcEKnTPvhjV6aGeqrCB/sbNop0Kszm0jsaWU4A==" } } }, @@ -8817,8 +8858,7 @@ "json-parse-better-errors": { "version": "1.0.2", "resolved": "https://registry.npmjs.org/json-parse-better-errors/-/json-parse-better-errors-1.0.2.tgz", - "integrity": "sha512-mrqyZKfX5EhL7hvqcV6WG1yYjnjeuYDzDhhcAAUrq8Po85NBQBJP+ZDUT75qZQ98IkUoBqdkExkukOU7Ts2wrw==", - "dev": true + "integrity": "sha512-mrqyZKfX5EhL7hvqcV6WG1yYjnjeuYDzDhhcAAUrq8Po85NBQBJP+ZDUT75qZQ98IkUoBqdkExkukOU7Ts2wrw==" }, "json-schema": { "version": "0.2.3", @@ -9536,8 +9576,7 @@ "lines-and-columns": { "version": "1.1.6", "resolved": "https://registry.npmjs.org/lines-and-columns/-/lines-and-columns-1.1.6.tgz", - "integrity": "sha1-HADHQ7QzzQpOgHWPe2SldEDZ/wA=", - "dev": true + "integrity": "sha1-HADHQ7QzzQpOgHWPe2SldEDZ/wA=" }, "load-json-file": { "version": "1.1.0", @@ -9896,7 +9935,6 @@ "version": "4.1.5", "resolved": "https://registry.npmjs.org/lru-cache/-/lru-cache-4.1.5.tgz", "integrity": "sha512-sWZlbEP2OsHNkXrMl5GYk/jKk70MBng6UU4YI/qGDYbgf6YbP4EvmqISbXCoJiRKs+1bSpFHVgQxvJ17F2li5g==", - "dev": true, "requires": { "pseudomap": "^1.0.2", "yallist": "^2.1.2" @@ -10483,8 +10521,7 @@ "nice-try": { "version": "1.0.5", "resolved": "https://registry.npmjs.org/nice-try/-/nice-try-1.0.5.tgz", - "integrity": "sha512-1nh45deeb5olNY7eX82BkPO7SSxR5SSYJiPTrTdFUVYwAl8CKMA5N9PjTYkHiRjisVcxcQ1HXdLhx2qxxJzLNQ==", - "dev": true + "integrity": "sha512-1nh45deeb5olNY7eX82BkPO7SSxR5SSYJiPTrTdFUVYwAl8CKMA5N9PjTYkHiRjisVcxcQ1HXdLhx2qxxJzLNQ==" }, "no-case": { "version": "2.3.2", @@ -10678,7 +10715,6 @@ "version": "2.5.0", "resolved": "https://registry.npmjs.org/normalize-package-data/-/normalize-package-data-2.5.0.tgz", "integrity": "sha512-/5CMN3T0R4XTj4DcGaexo+roZSdSFW/0AOOTROrjxzCG1wrWXEsGbRKevjlIL+ZDE4sZlJr5ED4YW0yqmkK+eA==", - "dev": true, "requires": { "hosted-git-info": "^2.1.4", "resolve": "^1.10.0", @@ -10709,7 +10745,6 @@ "version": "2.0.2", "resolved": "https://registry.npmjs.org/npm-run-path/-/npm-run-path-2.0.2.tgz", "integrity": "sha1-NakjLfo11wZ7TLLd8jV7GHFTbF8=", - "dev": true, "requires": { "path-key": "^2.0.0" } @@ -11146,7 +11181,6 @@ "version": "1.4.0", "resolved": "https://registry.npmjs.org/once/-/once-1.4.0.tgz", "integrity": "sha1-WDsap3WWHUsROsF9nFC6753Xa9E=", - "dev": true, "requires": { "wrappy": "1" } @@ -11168,8 +11202,7 @@ "opencollective-postinstall": { "version": "2.0.2", "resolved": "https://registry.npmjs.org/opencollective-postinstall/-/opencollective-postinstall-2.0.2.tgz", - "integrity": "sha512-pVOEP16TrAO2/fjej1IdOyupJY8KDUM1CvsaScRbw6oddvpQoOfGk4ywha0HKKVAD6RkW4x6Q+tNBwhf3Bgpuw==", - "dev": true + "integrity": "sha512-pVOEP16TrAO2/fjej1IdOyupJY8KDUM1CvsaScRbw6oddvpQoOfGk4ywha0HKKVAD6RkW4x6Q+tNBwhf3Bgpuw==" }, "opn": { "version": "5.3.0", @@ -11277,6 +11310,11 @@ "lcid": "^1.0.0" } }, + "os-shim": { + "version": "0.1.3", + "resolved": "https://registry.npmjs.org/os-shim/-/os-shim-0.1.3.tgz", + "integrity": "sha1-a2LDeRz3kJ6jXtRuF2WLtBfLORc=" + }, "os-tmpdir": { "version": "1.0.2", "resolved": "https://registry.npmjs.org/os-tmpdir/-/os-tmpdir-1.0.2.tgz", @@ -11297,8 +11335,7 @@ "p-finally": { "version": "1.0.0", "resolved": "https://registry.npmjs.org/p-finally/-/p-finally-1.0.0.tgz", - "integrity": "sha1-P7z7FbiZpEEjs0ttzBi3JDNqLK4=", - "dev": true + "integrity": "sha1-P7z7FbiZpEEjs0ttzBi3JDNqLK4=" }, "p-limit": { "version": "1.3.0", @@ -11494,8 +11531,7 @@ "path-key": { "version": "2.0.1", "resolved": "https://registry.npmjs.org/path-key/-/path-key-2.0.1.tgz", - "integrity": "sha1-QRyttXTFoUDTpLGRDUDYDMn0C0A=", - "dev": true + "integrity": "sha1-QRyttXTFoUDTpLGRDUDYDMn0C0A=" }, "path-parse": { "version": "1.0.6", @@ -11668,7 +11704,6 @@ "version": "3.2.0", "resolved": "https://registry.npmjs.org/please-upgrade-node/-/please-upgrade-node-3.2.0.tgz", "integrity": "sha512-gQR3WpIgNIKwBMVLkpMUeR3e1/E1y42bqDQZfql+kDeXd8COYfM8PQA4X6y7a8u9Ua9FHmsrrmirW2vHs45hWg==", - "dev": true, "requires": { "semver-compare": "^1.0.0" } @@ -12197,6 +12232,36 @@ "uniq": "^1.0.1" } }, + "pre-commit": { + "version": "1.2.2", + "resolved": "https://registry.npmjs.org/pre-commit/-/pre-commit-1.2.2.tgz", + "integrity": "sha1-287g7p3nI15X95xW186UZBpp7sY=", + "requires": { + "cross-spawn": "^5.0.1", + "spawn-sync": "^1.0.15", + "which": "1.2.x" + }, + "dependencies": { + "cross-spawn": { + "version": "5.1.0", + "resolved": "https://registry.npmjs.org/cross-spawn/-/cross-spawn-5.1.0.tgz", + "integrity": "sha1-6L0O/uWPz/b4+UUQoKVUu/ojVEk=", + "requires": { + "lru-cache": "^4.0.1", + "shebang-command": "^1.2.0", + "which": "^1.2.9" + } + }, + "which": { + "version": "1.2.14", + "resolved": "https://registry.npmjs.org/which/-/which-1.2.14.tgz", + "integrity": "sha1-mofEN48D6CfOyvGs31bHNsAcFOU=", + "requires": { + "isexe": "^2.0.0" + } + } + } + }, "prelude-ls": { "version": "1.1.2", "resolved": "https://registry.npmjs.org/prelude-ls/-/prelude-ls-1.1.2.tgz", @@ -12347,8 +12412,7 @@ "pseudomap": { "version": "1.0.2", "resolved": "https://registry.npmjs.org/pseudomap/-/pseudomap-1.0.2.tgz", - "integrity": "sha1-8FKijacOYYkX7wqKw0wa5aaChrM=", - "dev": true + "integrity": "sha1-8FKijacOYYkX7wqKw0wa5aaChrM=" }, "psl": { "version": "1.1.31", @@ -12421,6 +12485,16 @@ "integrity": "sha512-N5ZAX4/LxJmF+7wN74pUD6qAh9/wnvdQcjq9TZjevvXzSUo7bfmw91saqMjzGS2xq91/odN2dW/WOl7qQHNDGA==", "dev": true }, + "query-string": { + "version": "6.8.3", + "resolved": "https://registry.npmjs.org/query-string/-/query-string-6.8.3.tgz", + "integrity": "sha512-llcxWccnyaWlODe7A9hRjkvdCKamEKTh+wH8ITdTc3OhchaqUZteiSCX/2ablWHVrkVIe04dntnaZJ7BdyW0lQ==", + "requires": { + "decode-uri-component": "^0.2.0", + "split-on-first": "^1.0.0", + "strict-uri-encode": "^2.0.0" + } + }, "querystring": { "version": "0.2.0", "resolved": "https://registry.npmjs.org/querystring/-/querystring-0.2.0.tgz", @@ -13438,8 +13512,7 @@ "resolve-from": { "version": "3.0.0", "resolved": "https://registry.npmjs.org/resolve-from/-/resolve-from-3.0.0.tgz", - "integrity": "sha1-six699nWiBvItuZTM17rywoYh0g=", - "dev": true + "integrity": "sha1-six699nWiBvItuZTM17rywoYh0g=" }, "resolve-url": { "version": "0.2.1", @@ -13504,8 +13577,7 @@ "run-node": { "version": "1.0.0", "resolved": "https://registry.npmjs.org/run-node/-/run-node-1.0.0.tgz", - "integrity": "sha512-kc120TBlQ3mih1LSzdAJXo4xn/GWS2ec0l3S+syHDXP9uRr0JAT8Qd3mdMuyjqCzeZktgP3try92cEgf9Nks8A==", - "dev": true + "integrity": "sha512-kc120TBlQ3mih1LSzdAJXo4xn/GWS2ec0l3S+syHDXP9uRr0JAT8Qd3mdMuyjqCzeZktgP3try92cEgf9Nks8A==" }, "run-parallel": { "version": "1.1.9", @@ -13608,14 +13680,12 @@ "semver": { "version": "5.5.0", "resolved": "https://registry.npmjs.org/semver/-/semver-5.5.0.tgz", - "integrity": "sha512-4SJ3dm0WAwWy/NVeioZh5AntkdJoWKxHxcmyP622fOkgHa4z3R0TdBJICINyaSDE6uNwVc8gZr+ZinwZAH4xIA==", - "dev": true + "integrity": "sha512-4SJ3dm0WAwWy/NVeioZh5AntkdJoWKxHxcmyP622fOkgHa4z3R0TdBJICINyaSDE6uNwVc8gZr+ZinwZAH4xIA==" }, "semver-compare": { "version": "1.0.0", "resolved": "https://registry.npmjs.org/semver-compare/-/semver-compare-1.0.0.tgz", - "integrity": "sha1-De4hahyUGrN+nvsXiPavxf9VN/w=", - "dev": true + "integrity": "sha1-De4hahyUGrN+nvsXiPavxf9VN/w=" }, "send": { "version": "0.16.2", @@ -13786,7 +13856,6 @@ "version": "1.2.0", "resolved": "https://registry.npmjs.org/shebang-command/-/shebang-command-1.2.0.tgz", "integrity": "sha1-RKrGW2lbAzmJaMOfNj/uXer98eo=", - "dev": true, "requires": { "shebang-regex": "^1.0.0" } @@ -13794,8 +13863,7 @@ "shebang-regex": { "version": "1.0.0", "resolved": "https://registry.npmjs.org/shebang-regex/-/shebang-regex-1.0.0.tgz", - "integrity": "sha1-2kL0l0DAtC2yypcoVxyxkMmO/qM=", - "dev": true + "integrity": "sha1-2kL0l0DAtC2yypcoVxyxkMmO/qM=" }, "showdown": { "version": "1.3.0", @@ -13808,8 +13876,7 @@ "signal-exit": { "version": "3.0.2", "resolved": "https://registry.npmjs.org/signal-exit/-/signal-exit-3.0.2.tgz", - "integrity": "sha1-tf3AjxKH6hF4Yo5BXiUTK3NkbG0=", - "dev": true + "integrity": "sha1-tf3AjxKH6hF4Yo5BXiUTK3NkbG0=" }, "simple-swizzle": { "version": "0.2.2", @@ -14239,11 +14306,19 @@ "integrity": "sha1-PpNdfd1zYxuXZZlW1VEo6HtQhKM=", "dev": true }, + "spawn-sync": { + "version": "1.0.15", + "resolved": "https://registry.npmjs.org/spawn-sync/-/spawn-sync-1.0.15.tgz", + "integrity": "sha1-sAeZVX63+wyDdsKdROih6mfldHY=", + "requires": { + "concat-stream": "^1.4.7", + "os-shim": "^0.1.2" + } + }, "spdx-correct": { "version": "3.1.0", "resolved": "https://registry.npmjs.org/spdx-correct/-/spdx-correct-3.1.0.tgz", "integrity": "sha512-lr2EZCctC2BNR7j7WzJ2FpDznxky1sjfxvvYEyzxNyb6lZXHODmEoJeFu4JupYlkfha1KZpJyoqiJ7pgA1qq8Q==", - "dev": true, "requires": { "spdx-expression-parse": "^3.0.0", "spdx-license-ids": "^3.0.0" @@ -14252,14 +14327,12 @@ "spdx-exceptions": { "version": "2.2.0", "resolved": "https://registry.npmjs.org/spdx-exceptions/-/spdx-exceptions-2.2.0.tgz", - "integrity": "sha512-2XQACfElKi9SlVb1CYadKDXvoajPgBVPn/gOQLrTvHdElaVhr7ZEbqJaRnJLVNeaI4cMEAgVCeBMKF6MWRDCRA==", - "dev": true + "integrity": "sha512-2XQACfElKi9SlVb1CYadKDXvoajPgBVPn/gOQLrTvHdElaVhr7ZEbqJaRnJLVNeaI4cMEAgVCeBMKF6MWRDCRA==" }, "spdx-expression-parse": { "version": "3.0.0", "resolved": "https://registry.npmjs.org/spdx-expression-parse/-/spdx-expression-parse-3.0.0.tgz", "integrity": "sha512-Yg6D3XpRD4kkOmTpdgbUiEJFKghJH03fiC1OPll5h/0sO6neh2jqRDVHOQ4o/LMea0tgCkbMgea5ip/e+MkWyg==", - "dev": true, "requires": { "spdx-exceptions": "^2.1.0", "spdx-license-ids": "^3.0.0" @@ -14268,8 +14341,7 @@ "spdx-license-ids": { "version": "3.0.3", "resolved": "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-3.0.3.tgz", - "integrity": "sha512-uBIcIl3Ih6Phe3XHK1NqboJLdGfwr1UN3k6wSD1dZpmPsIkb8AGNbZYJ1fOBk834+Gxy8rpfDxrS6XLEMZMY2g==", - "dev": true + "integrity": "sha512-uBIcIl3Ih6Phe3XHK1NqboJLdGfwr1UN3k6wSD1dZpmPsIkb8AGNbZYJ1fOBk834+Gxy8rpfDxrS6XLEMZMY2g==" }, "spdy": { "version": "3.4.7", @@ -14334,6 +14406,11 @@ } } }, + "split-on-first": { + "version": "1.1.0", + "resolved": "https://registry.npmjs.org/split-on-first/-/split-on-first-1.1.0.tgz", + "integrity": "sha512-43ZssAJaMusuKWL8sKUBQXHWOpq8d6CfN/u1p4gUzfJkM05C8rxTmYrkIPTXapZpORA6LkkzcUulJ8FqA7Uudw==" + }, "split-string": { "version": "3.1.0", "resolved": "https://registry.npmjs.org/split-string/-/split-string-3.1.0.tgz", @@ -14355,8 +14432,7 @@ "sprintf-js": { "version": "1.0.3", "resolved": "https://registry.npmjs.org/sprintf-js/-/sprintf-js-1.0.3.tgz", - "integrity": "sha1-BOaSb2YolTVPPdAVIDYzuFcpfiw=", - "dev": true + "integrity": "sha1-BOaSb2YolTVPPdAVIDYzuFcpfiw=" }, "sshpk": { "version": "1.16.1", @@ -14508,6 +14584,11 @@ "readable-stream": "^2.3.0" } }, + "strict-uri-encode": { + "version": "2.0.0", + "resolved": "https://registry.npmjs.org/strict-uri-encode/-/strict-uri-encode-2.0.0.tgz", + "integrity": "sha1-ucczDHBChi9rFC3CdLvMWGbONUY=" + }, "string-width": { "version": "1.0.2", "resolved": "https://registry.npmjs.org/string-width/-/string-width-1.0.2.tgz", @@ -14553,8 +14634,7 @@ "strip-eof": { "version": "1.0.0", "resolved": "https://registry.npmjs.org/strip-eof/-/strip-eof-1.0.0.tgz", - "integrity": "sha1-u0P/VZim6wXYm1n80SnJgzE2Br8=", - "dev": true + "integrity": "sha1-u0P/VZim6wXYm1n80SnJgzE2Br8=" }, "strip-indent": { "version": "1.0.1", @@ -16107,7 +16187,6 @@ "version": "3.0.4", "resolved": "https://registry.npmjs.org/validate-npm-package-license/-/validate-npm-package-license-3.0.4.tgz", "integrity": "sha512-DpKm2Ui/xN7/HQKCtpZxoRWBhZ9Z0kqtygG8XCgNQ8ZlDnxuQmWhj566j8fN4Cu3/JmbhsDo7fcAJq4s9h27Ew==", - "dev": true, "requires": { "spdx-correct": "^3.0.0", "spdx-expression-parse": "^3.0.0" @@ -17490,7 +17569,6 @@ "version": "1.3.1", "resolved": "https://registry.npmjs.org/which/-/which-1.3.1.tgz", "integrity": "sha512-HxJdYWq1MTIQbJ3nw0cqssHoTNU267KlrDuGZ1WYlxDStUtKUhOaJmh112/TZmHxxUfuJqPXSOm7tDyas0OSIQ==", - "dev": true, "requires": { "isexe": "^2.0.0" } @@ -17539,8 +17617,7 @@ "wrappy": { "version": "1.0.2", "resolved": "https://registry.npmjs.org/wrappy/-/wrappy-1.0.2.tgz", - "integrity": "sha1-tSQ9jz7BqjXxNkYFvA0QNuMKtp8=", - "dev": true + "integrity": "sha1-tSQ9jz7BqjXxNkYFvA0QNuMKtp8=" }, "write": { "version": "1.0.3", @@ -17588,8 +17665,7 @@ "yallist": { "version": "2.1.2", "resolved": "https://registry.npmjs.org/yallist/-/yallist-2.1.2.tgz", - "integrity": "sha1-HBH5IY8HYImkfdUS+TxmmaaoHVI=", - "dev": true + "integrity": "sha1-HBH5IY8HYImkfdUS+TxmmaaoHVI=" }, "yargs": { "version": "3.32.0", diff --git a/package.json b/package.json index 27955cadf..9fe3b2c52 100644 --- a/package.json +++ b/package.json @@ -1,6 +1,6 @@ { "name": "ucsc-xena-geneset", - "version": "0.2.4", + "version": "0.3.0", "description": "Xena Gene Set Viewer", "main": "lib/index.js", "module": "es/index.js", @@ -15,21 +15,33 @@ "umd" ], "scripts": { - "build": "nwb build-react-component", + "build": "NODE_OPTIONS=--max_old_space_size=4096 nwb build-react-component", "clean": "nwb clean-module && nwb clean-demo", "start": "nwb serve-react-demo", - "test": "nwb test-react", - "lint": "eslint src tests/components tests/function", - "test:coverage": "nwb test-react --coverage", - "test:watch": "nwb test-react --server" + "test": "NODE_OPTIONS=--max_old_space_size=4096 nwb test-react", + "lint": "eslint --ignore-pattern src/data src tests/integration/render tests/integration/function tests/function ", + "test:coverage": "NODE_OPTIONS=--max_old_space_size=4096 nwb test-react --coverage", + "test:watch": "NODE_OPTIONS=--max_old_space_size=4096 nwb test-react --server" + }, + "pre-commit": [ + "lint" + ], + "husky": { + "hooks": { + "pre-commit": "npm run lint" + } }, "dependencies": { "d3": "^5.8.0", + "husky": "^3.0.5", "immutability-helper": "^2.6.5", "itertools": "^1.3.2", "material-responsive-grid": "^1.1.1", "postcss": "^6.0.21", "postcss-cssnext": "^3.1.0", + "pre-commit": "^1.2.2", + "prop-types": "latest", + "query-string": "^6.8.3", "react-bootstrap": "^0.32.1", "react-ga": "^2.5.7", "react-helmet": "^5.2.0", @@ -38,8 +50,7 @@ "react-toolbox": "2.0.0-beta.12", "tiny-lru": "^6.0.1", "ucsc-xena-client": "2.73.1", - "underscore": "^1.8.3", - "prop-types": "latest" + "underscore": "^1.8.3" }, "peerDependencies": { "react": "15.x" diff --git a/src/components/CohortSelector.js b/src/components/CohortSelector.js index ab97a13e5..18380c416 100644 --- a/src/components/CohortSelector.js +++ b/src/components/CohortSelector.js @@ -5,10 +5,14 @@ import BaseStyle from '../css/base.css'; import {Button} from 'react-toolbox/lib/button'; import FaFilter from 'react-icons/lib/fa/filter'; import {SubCohortSelector} from './SubCohortSelector'; -import {fetchCohortData, getSubCohortsOnlyForCohort} from '../functions/CohortFunctions'; +import { + fetchCohortData, getCohortsForView, getLabelForIndex, getSubCohortsForCohort, + getSubCohortsOnlyForCohort, +} from '../functions/CohortFunctions'; import {isEqual} from 'underscore'; import {Tooltip} from 'react-toolbox/lib'; import update from 'immutability-helper'; +import {ButtonGroup} from 'react-bootstrap'; const TooltipButton = Tooltip(Button); @@ -25,16 +29,6 @@ export class CohortSelector extends PureComponent { } handleChange = (event) => { - // populate selected sub cohorts for the cohorts - let subCohortsForSelected = getSubCohortsOnlyForCohort(event.target.value); - this.setState( { - selectedCohort: { - name: event.target.value, - subCohorts : subCohortsForSelected, - selectedSubCohorts:subCohortsForSelected, - }, - } - ); this.props.onChange(event.target.value); }; @@ -44,26 +38,27 @@ export class CohortSelector extends PureComponent { generateSubCohortDetails(){ - let selectedSubCohorts = this.state.selectedCohort.selectedSubCohorts; - let subCohortsForSelected = getSubCohortsOnlyForCohort(this.state.selectedCohort.name); + let selectedSubCohorts = this.props.selectedCohort.selectedSubCohorts; + let subCohortsForSelected = getSubCohortsOnlyForCohort(this.props.selectedCohort.name); if(subCohortsForSelected === undefined) return ''; return Object.values(selectedSubCohorts).map( s => { let splits = s.split('.'); - if(splits.length>0) { + if(splits.length>1) { return splits[1]; - } else { - return s; + } + else { + return splits[0]; } }).join(', '); } generateSubCohortLabels(){ - let subCohortsForSelected = getSubCohortsOnlyForCohort(this.state.selectedCohort.name); + let subCohortsForSelected = getSubCohortsForCohort(this.props.selectedCohort.name); // no sub cohorts exist if(!subCohortsForSelected) return ''; - let selectedSubCohorts = this.state.selectedCohort.selectedSubCohorts ? this.state.selectedCohort.selectedSubCohorts: subCohortsForSelected; + let selectedSubCohorts = this.props.selectedCohort.selectedSubCohorts ? this.props.selectedCohort.selectedSubCohorts: Object.keys(subCohortsForSelected); - const availableSubtypes = Object.keys(subCohortsForSelected).length; + const availableSubtypes = Object.keys(subCohortsForSelected).length+1; const selectedSubTypes = Object.values(selectedSubCohorts).filter( s => s ).length; if(selectedSubCohorts.length===0 || availableSubtypes===selectedSubTypes){ return `All ${availableSubtypes} Subtypes`; @@ -72,7 +67,7 @@ export class CohortSelector extends PureComponent { } onChangeSubCohort = (newSelected) => { - const changes = !isEqual(this.state.selectedSubCohorts,newSelected); + const changes = !isEqual(this.props.selectedSubCohorts,newSelected); this.setState({showSubCohortSelector:false}); if(!changes){ return ; @@ -81,13 +76,6 @@ export class CohortSelector extends PureComponent { let selectionObject = update(this.state.selectedCohort,{ selectedSubCohorts: { $set: newSelected }, }); - - this.setState( - { - selectedCohort: selectionObject, - } - ); - this.props.onChangeSubCohort(selectionObject); }; @@ -95,39 +83,58 @@ export class CohortSelector extends PureComponent { this.setState({showSubCohortSelector: true}); }; + hasSubCohorts(){ + let {filterCounts, filter} = this.props ; + return filterCounts && Object.keys(filterCounts).length>0 && filterCounts[filter] && filterCounts[filter].subCohortCounts && filterCounts[filter].subCohortCounts.length > 1; + } + render() { - let subCohortsForSelected = getSubCohortsOnlyForCohort(this.state.selectedCohort.name); + let {filterCounts,filter, swapCohorts,copyCohorts,cohortIndex,onVersusAll} = this.props ; + // let subCohortsForSelected = getSubCohortsForCohort(this.state.selectedCohort.name); let subCohortLabel = this.generateSubCohortLabels(); let subCohortDetails = this.generateSubCohortDetails(); + const cohorts = getCohortsForView(filter); + const availableCohorts = fetchCohortData().filter( c => cohorts.indexOf(c.name)>=0 ); + return (
+ {this.hasSubCohorts() && + }
Cohort {this.props.cohortLabel}
+ >Cohort {getLabelForIndex(cohortIndex)} +     +
+ +