diff --git a/A.Setting up Your Tools and Workspace/README.md b/A.Setting up Your Tools and Workspace/README.md index 06e2f54..1c4bcaf 100644 --- a/A.Setting up Your Tools and Workspace/README.md +++ b/A.Setting up Your Tools and Workspace/README.md @@ -2,14 +2,15 @@ This table provides an overview of the complete set of notebooks made available in this chapter. ## Detailed Index: -Notebook | Tags | Contributers | Last update +Notebook | Tags | Contributors | Last update --- | --- | --- | --- -A001 Open Signals | Open Signals, Biosignals, Physiological Signals Acquisition| Update authors| dd/mm/aa| +A001 Open Signals | Open Signals, Biosignals, Physiological Signals Acquisition| Rafael Silva, Hugo Plácido da Silva, Ana Fred| 16/05/2022| A002 Arduino Essentials | Arduino, Embedded Systems , Signals Acquisition| Update authors| dd/mm/aa| A003 Arduino - Getting started | Arduino, Embedded systems| Update authors| dd/mm/aa| A004 Seeeduino Nano Essentials | ```Arduino```, ```Embedded Systems ```, ```Signals Acquisition```| Afonso Raposo, Joana Pinto, Prof. Hugo Silva| 2021| A005 Seeeduino XIAO Essentials | Seeeduino XIAO, Embedded Systems , Signals Acquisition| Update authors| dd/mm/aa| A006 ScientISST - Arduino IDE tutorial | Sense, Arduino, IDE| Update authors| dd/mm/aa| A007 File Exploration | Hierarchical Data Format (HDF), Data Loading, Metadata| Update authors| dd/mm/aa| -A008 Setup your Python workspace | Python, Anaconda Navigator, Jupyter Notebooks, IPython, Spyder| Update authors| dd/mm/aa| +A008 Setup your Python workspace | `Programming`, `Python`, `Anaconda`, `Data Visualization`, `Data Structures`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 12/05/2022| A009 Essentials of Post-processing | Low-Pass Filter, Python, Plotting| Update authors| dd/mm/aa| +A010 Python File Handling and Visualization | `Python`, `File Handling`, `Data Visualization`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 22/05/2022| diff --git a/B.Instrumentation/README.md b/B.Instrumentation/README.md index 08c62ee..bf4acbc 100644 --- a/B.Instrumentation/README.md +++ b/B.Instrumentation/README.md @@ -2,7 +2,7 @@ This table provides an overview of the complete set of notebooks made available in this chapter. ## Detailed Index: -Notebook | Tags | Contributers | Last update +Notebook | Tags | Contributors | Last update --- | --- | --- | --- B001 Basic active circuits with an OpAmp | ```Operational Amplifiers```, ```Circuit Analysis```, ```Arduino```| Afonso Raposo, Joana Pinto, Prof. João Sanches; Prof. Hugo Silva| 2021| B002 Frequency response | Electronic components, Instrumentation, Passive Circuits| Update authors| dd/mm/aa| diff --git a/C.Biosignal Acquisition/README.md b/C.Biosignal Acquisition/README.md index 641b404..f6b4052 100644 --- a/C.Biosignal Acquisition/README.md +++ b/C.Biosignal Acquisition/README.md @@ -2,7 +2,7 @@ This table provides an overview of the complete set of notebooks made available in this chapter. ## Detailed Index: -Notebook | Tags | Contributers | Last update +Notebook | Tags | Contributors | Last update --- | --- | --- | --- C001 Science Journal | Experimental Journal, Mobile Devices, Data Acquisition| Update authors| dd/mm/aa| C002 OpenSignals for Annotations | Open Signals, HDF5 Files, Annotations| Update authors| dd/mm/aa| @@ -10,3 +10,4 @@ C003 ESP32 Firebase Connection | Internet of Things, Microcontrollers, Google Fi C004 Live Streaming and Signal Processing | ```Serial Port```, ```Python```, ```Live Streaming```, `Signal Processing`| Afonso Raposo, Joana Pinto, Prof. Hugo Silva| 2021| C005 Basic Primer on APIs | Application Programming Interfaces (APIs), Python, BITalino| Update authors| dd/mm/aa| C006 Real-time Analytics | Electromyography (EMG), Python, Biofeedback System| Update authors| dd/mm/aa| +C007 Principles of Biosignal Acquisition | `Biosignal Acquisition`, `SENSE`, `SENSE API`, `Data Visualization`| Rafael Silva, Hugo Plácido da Silva, Ana Fred| 16/05/2022| diff --git a/D.Biosignal Processing/README.md b/D.Biosignal Processing/README.md index 1ec5130..b222e9d 100644 --- a/D.Biosignal Processing/README.md +++ b/D.Biosignal Processing/README.md @@ -2,9 +2,10 @@ This table provides an overview of the complete set of notebooks made available in this chapter. ## Detailed Index: -Notebook | Tags | Contributers | Last update +Notebook | Tags | Contributors | Last update --- | --- | --- | --- D001 IIR Adaptive Filtering | Body Temperature, Thermometer, Adaptive filters,IIR filters| Update authors| dd/mm/aa| D002 Kalman | Kalman filter, Python, Signal Processing, Low-pass Filters| Update authors| dd/mm/aa| D003 Signal Conversion | ADC, Signal conversion| Update authors| dd/mm/aa| D004 ECG Synthesizer | Electrocardiogram, ECG, ECG synthesizer| Update authors| dd/mm/aa| +D005 Frequency Analysis | `Frequency Analysis`, `FFT`, `Filter`, `BioSPPy`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 30/05/2022| diff --git a/E.Managing Data Storage and Visualization/README.md b/E.Managing Data Storage and Visualization/README.md index 4333a02..cd0fb7c 100644 --- a/E.Managing Data Storage and Visualization/README.md +++ b/E.Managing Data Storage and Visualization/README.md @@ -2,7 +2,7 @@ This table provides an overview of the complete set of notebooks made available in this chapter. ## Detailed Index: -Notebook | Tags | Contributers | Last update +Notebook | Tags | Contributors | Last update --- | --- | --- | --- E001 From Python to the World | Web Sockets (WS), Data Reception, Data Transmission,Client-server architecture| Update authors| dd/mm/aa| E002 Interchanging Structured Data | JavaScript Object Notation (JSON), Structure Data, Metadata, HTML,CSS,JS| Update authors| dd/mm/aa| diff --git a/F.Machine Learning and Knowledge Extraction/README.md b/F.Machine Learning and Knowledge Extraction/README.md index 268e6bd..bd36e4f 100644 --- a/F.Machine Learning and Knowledge Extraction/README.md +++ b/F.Machine Learning and Knowledge Extraction/README.md @@ -2,9 +2,11 @@ This table provides an overview of the complete set of notebooks made available in this chapter. ## Detailed Index: -Notebook | Tags | Contributers | Last update +Notebook | Tags | Contributors | Last update --- | --- | --- | --- F001 Working with Features | Electrocardiography (ECG), Python, Poincare Plot, Heart Rate Variability| Update authors| dd/mm/aa| F002 Signal Classification Using SL | Supervised Learning, Biosignals,Signal Classification| Update authors| dd/mm/aa| F003 Classification of Human Activity Data | Supervised Learning,Unsupervised Learning, Accelerometry Data| Update authors| dd/mm/aa| F004 Clustering of Human Activity Data | Clustering,Unsupervised Learning, Accelerometry Data| Update authors| dd/mm/aa| +F005 Biosignal Feature Extraction | `ECG`, `BioSSPy`, `Feature Extraction`, `HRV`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 13/06/2022| +F006 Introduction to Classification | `Classification`, `ML`, `Scikit Learn`, `HRV`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 18/06/2022| diff --git a/G.Community Applications and Other Useful Content/README.md b/G.Community Applications and Other Useful Content/README.md index 5b0b0fc..0c93db0 100644 --- a/G.Community Applications and Other Useful Content/README.md +++ b/G.Community Applications and Other Useful Content/README.md @@ -2,7 +2,7 @@ This table provides an overview of the complete set of notebooks made available in this chapter. ## Detailed Index: -Notebook | Tags | Contributers | Last update +Notebook | Tags | Contributors | Last update --- | --- | --- | --- G001 Continuous Body Temperature Measurement using an IR Senso | Body Temperature, Thermometer, Kalman filter,IIR filters| Update authors| dd/mm/aa| G002 PPG from Smartphone Camera | Photoplethysmogram (PPG), Smartphone, Camera| Update authors| dd/mm/aa| diff --git a/MasterTable.md b/MasterTable.md index d6d2d67..2d3b692 100644 --- a/MasterTable.md +++ b/MasterTable.md @@ -2,17 +2,18 @@ This table provides an overview of the complete set of notebooks made available in this repository. ## Detailed Index: -Notebook | Chapter | Tags | Contributers | Last update +Notebook | Chapter | Tags | Contributors | Last update --- | --- | --- | --- | --- -A001 Open Signals | A | Open Signals, Biosignals, Physiological Signals Acquisition| Update authors| dd/mm/aa| +A001 Open Signals | A | Open Signals, Biosignals, Physiological Signals Acquisition| Rafael Silva, Hugo Plácido da Silva, Ana Fred| 16/05/2022| A002 Arduino Essentials | A | Arduino, Embedded Systems , Signals Acquisition| Update authors| dd/mm/aa| A003 Arduino - Getting started | A | Arduino, Embedded systems| Update authors| dd/mm/aa| A004 Seeeduino Nano Essentials | A | ```Arduino```, ```Embedded Systems ```, ```Signals Acquisition```| Afonso Raposo, Joana Pinto, Prof. Hugo Silva| 2021| A005 Seeeduino XIAO Essentials | A | Seeeduino XIAO, Embedded Systems , Signals Acquisition| Update authors| dd/mm/aa| A006 ScientISST - Arduino IDE tutorial | A | Sense, Arduino, IDE| Update authors| dd/mm/aa| A007 File Exploration | A | Hierarchical Data Format (HDF), Data Loading, Metadata| Update authors| dd/mm/aa| -A008 Setup your Python workspace | A | Python, Anaconda Navigator, Jupyter Notebooks, IPython, Spyder| Update authors| dd/mm/aa| +A008 Setup your Python workspace | A | `Programming`, `Python`, `Anaconda`, `Data Visualization`, `Data Structures`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 12/05/2022| A009 Essentials of Post-processing | A | Low-Pass Filter, Python, Plotting| Update authors| dd/mm/aa| +A010 Python File Handling and Visualization | A | `Python`, `File Handling`, `Data Visualization`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 22/05/2022| B001 Basic active circuits with an OpAmp | B | ```Operational Amplifiers```, ```Circuit Analysis```, ```Arduino```| Afonso Raposo, Joana Pinto, Prof. João Sanches; Prof. Hugo Silva| 2021| B002 Frequency response | B | Electronic components, Instrumentation, Passive Circuits| Update authors| dd/mm/aa| B003 Equipment of electronics laboratory and basic circuits | B | `Electronics`, `Laboratory`, `Instrumentation`, `Arduino`, `IDE`, `Seeeduino`| Afonso Raposo; Prof. Hugo Silva| 2021| @@ -29,10 +30,12 @@ C003 ESP32 Firebase Connection | C | Internet of Things, Microcontrollers, Googl C004 Live Streaming and Signal Processing | C | ```Serial Port```, ```Python```, ```Live Streaming```, `Signal Processing`| Afonso Raposo, Joana Pinto, Prof. Hugo Silva| 2021| C005 Basic Primer on APIs | C | Application Programming Interfaces (APIs), Python, BITalino| Update authors| dd/mm/aa| C006 Real-time Analytics | C | Electromyography (EMG), Python, Biofeedback System| Update authors| dd/mm/aa| +C007 Principles of Biosignal Acquisition | C | `Biosignal Acquisition`, `SENSE`, `SENSE API`, `Data Visualization`| Rafael Silva, Hugo Plácido da Silva, Ana Fred| 16/05/2022| D001 IIR Adaptive Filtering | D | Body Temperature, Thermometer, Adaptive filters,IIR filters| Update authors| dd/mm/aa| D002 Kalman | D | Kalman filter, Python, Signal Processing, Low-pass Filters| Update authors| dd/mm/aa| D003 Signal Conversion | D | ADC, Signal conversion| Update authors| dd/mm/aa| D004 ECG Synthesizer | D | Electrocardiogram, ECG, ECG synthesizer| Update authors| dd/mm/aa| +D005 Frequency Analysis | D | `Frequency Analysis`, `FFT`, `Filter`, `BioSPPy`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 30/05/2022| E001 From Python to the World | E | Web Sockets (WS), Data Reception, Data Transmission,Client-server architecture| Update authors| dd/mm/aa| E002 Interchanging Structured Data | E | JavaScript Object Notation (JSON), Structure Data, Metadata, HTML,CSS,JS| Update authors| dd/mm/aa| E003 Into the World Wild Web | E | HyperText Markup Language (HTML), Web Page Structuring, Metadata, HTML/CSS/JS| Update authors| dd/mm/aa| @@ -42,6 +45,8 @@ F001 Working with Features | F | Electrocardiography (ECG), Python, Poincare Plo F002 Signal Classification Using SL | F | Supervised Learning, Biosignals,Signal Classification| Update authors| dd/mm/aa| F003 Classification of Human Activity Data | F | Supervised Learning,Unsupervised Learning, Accelerometry Data| Update authors| dd/mm/aa| F004 Clustering of Human Activity Data | F | Clustering,Unsupervised Learning, Accelerometry Data| Update authors| dd/mm/aa| +F005 Biosignal Feature Extraction | F | `ECG`, `BioSSPy`, `Feature Extraction`, `HRV`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 13/06/2022| +F006 Introduction to Classification | F | `Classification`, `ML`, `Scikit Learn`, `HRV`| Rafael Silva, Hugo Plácido da Silva and Ana Fred| 18/06/2022| G001 Continuous Body Temperature Measurement using an IR Senso | G | Body Temperature, Thermometer, Kalman filter,IIR filters| Update authors| dd/mm/aa| G002 PPG from Smartphone Camera | G | Photoplethysmogram (PPG), Smartphone, Camera| Update authors| dd/mm/aa| G003 Autoencoders Respiration | G | Autoencoders, Neural Networks, Supervised Learning, Apnea Detection| Update authors| dd/mm/aa| diff --git a/X.Example_Files/README.md b/X.Example_Files/README.md deleted file mode 100644 index aeeb047..0000000 --- a/X.Example_Files/README.md +++ /dev/null @@ -1,6 +0,0 @@ -# X.Example_Files - This table provides an overview of the complete set of notebooks made available in this chapter. - - ## Detailed Index: -Notebook | Tags | Contributers | Last update ---- | --- | --- | --- diff --git a/_Courses/IPS-ESS-TMED-Telemedicine.md b/_Courses/IPS-ESS-TMED-Telemedicine.md index 95e7a25..30b65a2 100644 --- a/_Courses/IPS-ESS-TMED-Telemedicine.md +++ b/_Courses/IPS-ESS-TMED-Telemedicine.md @@ -28,7 +28,7 @@ ## Program Title | Last Update | Chapter | Open Notebook --- | ---| --- | --- -A001 Open Signals | dd/mm/aa | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A001%20Open%20Signals/A001%20Open%20Signals.ipynb) +A001 Open Signals | 16/05/2022 | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A001%20Open%20Signals/A001%20Open%20Signals.ipynb) A002 Arduino Essentials | dd/mm/aa | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A002%20Arduino%20Essentials/A002%20Arduino%20Essentials.ipynb) B008 Analog Signals | dd/mm/aa | B.Instrumentation | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/B.Instrumentation/B008%20Analog%20Signals/B008%20Analog%20Signals.ipynb) B009 Data transmission | dd/mm/aa | B.Instrumentation | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/B.Instrumentation/B009%20Data%20transmission/B009%20Data%20transmission.ipynb) diff --git a/_Courses/IST-UL-IEB-IntroductiontoBiomedicalEngineering.md b/_Courses/IST-UL-IEB-IntroductiontoBiomedicalEngineering.md index 057ab89..f174db1 100644 --- a/_Courses/IST-UL-IEB-IntroductiontoBiomedicalEngineering.md +++ b/_Courses/IST-UL-IEB-IntroductiontoBiomedicalEngineering.md @@ -38,8 +38,8 @@ Prof. Ana Luisa Nobre Fred ([afred@lx.it.pt](mailto:afred@lx.it.pt)) ## Program Title | Last Update | Chapter | Open Notebook --- | --- | --- | --- -A008 Setup your Python workspace | dd/mm/aa | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A008%20Setup%20your%20Python%20workspace/A008%20Setup%20your%20Python%20workspace.ipynb) -A001 Open Signals | dd/mm/aa | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A001%20Open%20Signals/A001%20Open%20Signals.ipynb) +A008 Setup your Python workspace | 12/05/2022 | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A008%20Setup%20your%20Python%20workspace/A008%20Setup%20your%20Python%20workspace.ipynb) +A001 Open Signals | 16/05/2022 | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A001%20Open%20Signals/A001%20Open%20Signals.ipynb) A007 File Exploration | dd/mm/aa | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A007%20File%20Exploration/A007%20File%20Exploration.ipynb) A009 Essentials of Post-processing | dd/mm/aa | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A009%20Essentials%20of%20Post-processing/A009%20Essentials%20of%20Post-processing.ipynb) F001 Working with Features | dd/mm/aa | F.Machine Learning and Knowledge Extraction | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/F.Machine%20Learning%20and%20Knowledge%20Extraction/F001%20Working%20with%20Features/F001%20Working%20with%20Features.ipynb) diff --git a/_Courses/IST-UL-MLB-MachineLearninginBioengineering.md b/_Courses/IST-UL-MLB-MachineLearninginBioengineering.md index 2641df0..f8f55aa 100644 --- a/_Courses/IST-UL-MLB-MachineLearninginBioengineering.md +++ b/_Courses/IST-UL-MLB-MachineLearninginBioengineering.md @@ -31,7 +31,7 @@ Prof. Ana Luisa Nobre Fred ([afred@lx.it.pt](mailto:afred@lx.it.pt)) ## Program Title | Last Update | Chapter | Open Notebook --- | ---| --- | --- -A008 Setup your Python workspace | dd/mm/aa | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A008%20Setup%20your%20Python%20workspace/A008%20Setup%20your%20Python%20workspace.ipynb) +A008 Setup your Python workspace | 12/05/2022 | A.Setting up Your Tools and Workspace | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/A.Setting%20up%20Your%20Tools%20and%20Workspace/A008%20Setup%20your%20Python%20workspace/A008%20Setup%20your%20Python%20workspace.ipynb) C001 Science Journal | dd/mm/aa | C.Biosignal Acquisition | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/C.Biosignal%20Acquisition/C001%20Science%20Journal/C001%20Science%20Journal.ipynb) F002 Signal Classification Using SL | dd/mm/aa | F.Machine Learning and Knowledge Extraction | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/F.Machine%20Learning%20and%20Knowledge%20Extraction/F002%20Signal%20Classification%20Using%20SL/F002%20Signal%20Classification%20Using%20SL.ipynb) F003 Classification of Human Activity Data | dd/mm/aa | F.Machine Learning and Knowledge Extraction | [![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://githubtocolab.com/scientisst/notebooks/blob/master/F.Machine%20Learning%20and%20Knowledge%20Extraction/F003%20Classification%20of%20Human%20Activity%20Data/F003%20Classification%20of%20Human%20Activity%20Data.ipynb)