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Docs #1

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RagnarGrootKoerkamp opened this issue Jul 12, 2024 · 2 comments
Open

Docs #1

RagnarGrootKoerkamp opened this issue Jul 12, 2024 · 2 comments

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@RagnarGrootKoerkamp
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It's unclear to me what is the difference betwen MinimizerQueue and ImplicitMinimizerQueue.
@RagnarGrootKoerkamp
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Oh I see; the implicit one also returns positions. Somewhat confusing naming 😅

@imartayan
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Hi Ragnar!
Yes it only stores the hashes and the positions, not the k-mers themselves. This is slightly better if we only need the positions of the minimizers, e.g. for t-mers in mod-minimizers.
Sorry for the naming, I didn't have much inspiration at the time 😅

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@RagnarGrootKoerkamp @imartayan