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Release reticulate 1.36.0 #1577

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13 of 20 tasks
t-kalinowski opened this issue Apr 8, 2024 · 2 comments
Closed
13 of 20 tasks

Release reticulate 1.36.0 #1577

t-kalinowski opened this issue Apr 8, 2024 · 2 comments

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@t-kalinowski
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t-kalinowski commented Apr 8, 2024 •
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Prepare for release:

  • git pull
  • Check current CRAN check results
  • Polish NEWS
  • urlchecker::url_check()
  • devtools::check(remote = TRUE, manual = TRUE)
  • devtools::check_win_devel()
  • revdepcheck::cloud_check()
  • Update cran-comments.md
  • git push
  • Draft blog post
  • Slack link to draft blog in #open-source-comms

Submit to CRAN:

  • usethis::use_version('minor')
  • devtools::submit_cran()
  • Approve email

Wait for CRAN...

  • Accepted 🎉
  • Finish & publish blog post
  • Add link to blog post in pkgdown news menu
  • usethis::use_github_release()
  • usethis::use_dev_version(push = TRUE)
  • Tweet
@t-kalinowski
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t-kalinowski commented Apr 9, 2024 •
edited
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CRAN response:

package reticulate_1.36.0.tar.gz has been auto-processed.
The auto-check found additional issues for the last version released on CRAN:
rchk https://raw.githubusercontent.com/kalibera/cran-checks/master/rchk/results/reticulate.out
CRAN will have to check these additional issues manually.
IMMEDIATELY reply-all in case you submitted a version that will not pass these checks.

Contents of rchk reported from previous submission:

Package reticulate version 1.35.0
Package built using 86189/R 4.4.0; x86_64-pc-linux-gnu; 2024-03-25 23:35:55 UTC; unix   
Checked with rchk version fdc068715daa3a256062cc20e0d4a5157dacc9a4 LLVM version 14.0.6
More information at https://github.com/kalibera/cran-checks/blob/master/rchk/PROTECT.md
For rchk in docker image see https://github.com/kalibera/rchk/blob/master/doc/DOCKER.md

Function py_get_formals(PyObjectRef)
  [UP] unprotected variable out while calling allocating function Rf_install reticulate/src/python.cpp:1518

Running rchk locally, I can reproduce this one, which is a false positive. But there are also other rchk outputs (that I assume are filtered out by CRAN) that require some closer inspection.

Full rchk output 

objdump: Warning: Unrecognized form: 0x23
<<snip, ~300 lines 'objdump: Warning: Unrecognized form: 0x23'>>
ERROR: too many states (abstraction error?) in function strptime_internal
ERROR: too many states (abstraction error?) in function RunGenCollect

Function (anonymous namespace)::main_process_python_info_unix()
  [UP] calling allocating function Rcpp::internal::generic_name_proxy<19, Rcpp::PreserveStorage>::operator=(SEXPREC*)(?,V) with argument allocated using Rf_ScalarString /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:2532

Function Rcpp::Armor<SEXPREC*>::init(SEXPREC*)
  [PB] has possible protection stack imbalance /rchk/packages/libs/Rcpp/include/Rcpp/protection/Armor.h:47

Function Rcpp::Armor<SEXPREC*>::~Armor()
  [PB] has negative depth /rchk/packages/libs/Rcpp/include/Rcpp/protection/Armor.h:41
  [UP] attempt to unprotect more items (1) than protected (0), results will be incomplete /rchk/packages/libs/Rcpp/include/Rcpp/protection/Armor.h:41
  [PB] has possible protection stack imbalance /rchk/packages/libs/Rcpp/include/Rcpp/protection/Armor.h:42

Function Rcpp::Environment_Impl<Rcpp::PreserveStorage>::namespace_env(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)
  [UP] ignoring variable <unnamed var:   %11 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function Rcpp::RObject_Impl<Rcpp::PreserveStorage> pandas_nullable_collect_values<16>(reticulate::libpython::_object*)
  [UP] ignoring variable <unnamed var:   %11 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function Rcpp::Rcpp_protect(SEXPREC*)
  [PB] has possible protection stack imbalance /rchk/packages/libs/Rcpp/include/Rcpp/protection/Shield.h:25

Function Rcpp::Rcpp_unprotect(int)
  [PB] has an unsupported form of unprotect with a variable results will be incomplete /rchk/packages/libs/Rcpp/include/Rcpp/protection/Shield.h:31
  [UP] unsupported form of unprotect, unprotecting all variables, results will be incomplete /rchk/packages/libs/Rcpp/include/Rcpp/protection/Shield.h:31

Function Rcpp::Vector<19, Rcpp::PreserveStorage>::push_back_name__impl(SEXPREC* const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, Rcpp::traits::integral_constant<bool, true>)
  [UP] unprotected variable names while calling allocating function Rf_allocVector /rchk/packages/libs/Rcpp/include/Rcpp/vector/Vector.h:682

Function Rcpp::internal::convert_using_rfunction(SEXPREC*, char const*)
  [UP] ignoring variable <unnamed var:   %10 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function Rcpp::internal::generic_name_proxy<19, Rcpp::PreserveStorage>::set(SEXPREC*)
  [UP] ignoring variable rhs as it has address taken, results will be incomplete 

Function _reticulate_as_iterator
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_conditionMessage_from_py_exception
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_is_py_object
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_is_python3
  [UP] ignoring variable <unnamed var:   %10 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_main_process_python_info
  [UP] ignoring variable <unnamed var:   %10 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %11 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_bool_impl
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %17 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_call_impl
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %20 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_capsule
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_compare_impl
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_convert_pandas_df
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_convert_pandas_series
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_del_attr
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_del_item
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_dict_get_item
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %17 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_dict_get_keys
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_dict_get_keys_as_str
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_dict_impl
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_dict_length
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_eval_impl
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %17 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_flush_output
  [UP] ignoring variable <unnamed var:   %10 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %11 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_get_attr
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_get_attr_types
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_get_convert
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_get_formals
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_get_item
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_has_attr
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_has_method
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %17 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_id
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_interrupts_pending
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_is_callable
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_is_function
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_is_none
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_is_null_xptr
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_iter_next
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %17 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_iterate
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %20 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_len_impl
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %17 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_list_attributes_impl
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_list_length
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_list_submodules
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_module_import
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_new_ref
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_none_impl
  [UP] ignoring variable <unnamed var:   %10 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_numpy_available_impl
  [UP] ignoring variable <unnamed var:   %10 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_ref_to_r
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_ref_to_r_with_convert
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %17 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_repr
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_run_file_impl
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_run_string_impl
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %20 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_set_attr
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_set_convert
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %17 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_set_item
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_slice
  [UP] ignoring variable <unnamed var:   %19 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_str_impl
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_to_r_cpp
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_tuple
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_py_tuple_length
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_r_convert_dataframe
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_r_convert_date
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_r_to_py_impl
  [UP] ignoring variable <unnamed var:   %16 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_readline
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_was_python_initialized_by_reticulate
  [UP] ignoring variable <unnamed var:   %10 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_write_stderr
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function _reticulate_write_stdout
  [UP] ignoring variable <unnamed var:   %13 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function call_r_function
  [UP] ignoring variable <unnamed var:   %20 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %14 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] calling allocating function Rf_eval with argument allocated using current_env() /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:2254

Function py_convert_pandas_series(PyObjectRef)
  [UP] ignoring variable <unnamed var:   %55 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function py_dict_get_item(PyObjectRef, Rcpp::RObject_Impl<Rcpp::PreserveStorage>)
  [UP] unprotected variable <unnamed var:   %3 = alloca %struct.SEXPREC*, align 8> while calling allocating function PyObjectRef::~PyObjectRef() /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:3091

Function py_fetch_error(bool)
  [UP] calling allocating function py_capsule_new(SEXPREC*) with a fresh pointer (r_call <arg 1>) /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:879
  [PB] has negative depth /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:882
  [UP] attempt to unprotect more items (1) than protected (0), results will be incomplete /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:882
  [UP] calling allocating function Rcpp::Environment_Impl<Rcpp::PreserveStorage>::Environment_Impl(SEXPREC*) with argument allocated using Rcpp::Environment_Impl<Rcpp::PreserveStorage>::get(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&) const /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:896
  [PB] has possible protection stack imbalance /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:906

Function py_get_formals(PyObjectRef)
  [UP] unprotected variable arg_default while calling allocating function Rf_installChar /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:1790
  [UP] unprotected variable arg_default while calling allocating function Rf_mkCharCE /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:1790

Function py_initialize(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, bool, bool, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)
  [UP] calling allocating function std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > Rcpp::as<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > >(SEXPREC*) with argument allocated using SEXPREC* Rcpp::Function_Impl<Rcpp::PreserveStorage>::operator()<char [28], int>(char const (&) [28], int const&) const /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:2657

Function py_iterate(PyObjectRef, Rcpp::Function_Impl<Rcpp::PreserveStorage>, bool)
  [UP] unprotected variable <unnamed var:   %4 = alloca %struct.SEXPREC*, align 8> while calling allocating function std::__1::vector<Rcpp::RObject_Impl<Rcpp::PreserveStorage>, std::__1::allocator<Rcpp::RObject_Impl<Rcpp::PreserveStorage> > >::~vector() /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:4180

Function py_to_r_cpp(SEXPREC*)
  [UP] unprotected variable ret while calling allocating function Rf_defineVar(S:simple,?,?) /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:1251

Function py_to_r_cpp(reticulate::libpython::_object*, bool, bool)
  [UP] ignoring variable <unnamed var:   %100 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %109 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %112 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %80 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %84 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %88 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] ignoring variable <unnamed var:   %94 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
  [UP] unprotected variable klass while calling allocating function Rf_mkChar /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:1463

Function r_convert_dataframe(Rcpp::RObject_Impl<Rcpp::PreserveStorage>, bool)
  [UP] calling allocating function PyObjectRef::PyObjectRef(SEXPREC*, bool) with argument allocated using SEXPREC* Rcpp::Function_Impl<Rcpp::PreserveStorage>::operator()<Rcpp::RObject_Impl<Rcpp::PreserveStorage>, bool>(Rcpp::RObject_Impl<Rcpp::PreserveStorage> const&, bool const&) const /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:3776

Function r_to_py(Rcpp::RObject_Impl<Rcpp::PreserveStorage>, bool)
  [UP] calling allocating function PyObjectRef::PyObjectRef(SEXPREC*, bool) with a fresh pointer (ref_sexp <arg 2>) /rchk/packages/build/PdZEffZF/reticulate/src/python.cpp:1945

Function try_py_resolve_module_proxy(SEXPREC*)
  [UP] ignoring variable proxy as it has address taken, results will be incomplete 

Function void Rcpp::Vector<16, Rcpp::PreserveStorage>::fill__dispatch<SEXPREC*>(Rcpp::traits::integral_constant<bool, true>, SEXPREC* const&)
  [UP] ignoring variable <unnamed var:   %8 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function void Rcpp::Vector<19, Rcpp::PreserveStorage>::push_back<PyObjectRef>(PyObjectRef const&)
  [UP] ignoring variable <unnamed var:   %5 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 

Function void Rcpp::Vector<19, Rcpp::PreserveStorage>::push_back<SEXPREC*>(SEXPREC* const&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)
  [UP] ignoring variable <unnamed var:   %7 = alloca %struct.SEXPREC*, align 8> as it has address taken, results will be incomplete 
Analyzed 2078 functions, traversed 18966 states.
Library name (usually package name): reticulate
Initialization function: R_init_reticulate
Functions: 73
Checked call to R_registerRoutines: 1

Rchk version: 1cae90e208e97a5c41f1c3e128d99b197478443e
R version: 84255/R Under development (unstable) (2023-04-13 r84255)
LLVM version: 14.0.0

This was referenced Apr 9, 2024
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t-kalinowski commented Apr 15, 2024 •
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revdepcheck did not catch the RcppArmadillo CRAN failures because scipy was not preinstalled on the cloud runner: r-lib/revdepcheck#378

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