From a79eae5f8a1e9147aa68b7d2f1073bc2623b178a Mon Sep 17 00:00:00 2001
From: Gabriel Lencioni Lovate
 <39889038+gabriellovate@users.noreply.github.com>
Date: Wed, 15 Nov 2023 18:52:33 +0100
Subject: [PATCH] docs: make installation more clear

---
 readme.md | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/readme.md b/readme.md
index 59b03e0..d158330 100644
--- a/readme.md
+++ b/readme.md
@@ -15,6 +15,10 @@ The pipeline is written in Nextflow, which can be used on any POSIX compatible s
 1. Install [Nextflow](https://www.nextflow.io/docs/latest/getstarted.html#installation)
 2. Install [miniconda](https://docs.conda.io/projects/miniconda/en/latest/)
 3. Install [apptainer](https://apptainer.org/docs/admin/main/installation.html#install-unprivileged-from-pre-built-binaries) (from our experience, installing from the pre-built binaries is the easiest way to go)
+4. With nextflow installed, you only have to run the pipeline, if you would like to cache the pipeline without running it you can use the following command:
+```bash
+nextflow pull gabriellovate/RNAswarm
+```
 
 In the future, only either conda or apptainer will be needed.