tune package

[Ji-square]

Error:
! error in pak subprocess
Caused by error in select_next_task(state):
! Cannot select new package installation task.
ℹ 1 package still waiting to install: tune.
ℹ This is an internal error in pkgdepends, please report an issue at

[gaborcsardi]

Can you show the code you are running and some information about your system and pak installation?

[Ji-square]

Hello
yes here it is
taylor()
pak::pak(
paste0(
"tidymodels/",
c("tune", "workflows", "rsample", "tailor")
)
)
Yes sure Error:
! error in pak subprocess
Caused by error in select_next_task(state):
! Cannot select new package installation task.
ℹ 1 package still waiting to install: tune.
ℹ This is an internal error in pkgdepends, please report an issue at

Apple M1
darwin-arm64

[gaborcsardi]

Can you show the full output? Also the output of this?

sessioInfo()
pak::pak_sitrep()

[gaborcsardi]

Nevertheless, this typically means a circular dependency between some packages, in which case it is impossible to install them.

[Ji-square]

Here it is:

pak::pak(
+   paste0(
+     "tidymodels/",
+     c("tune", "workflows", "rsample", "tailor")
+   )
+ )
                                                                            
→ Will update 1 package.
→ Will download 1 package with unknown size.
+ tune 1.2.1 → 1.2.1.9000 👷🔧 ⬇ (GitHub: bc5422a)

! tune is loaded in the current R session, you probably need to restart R after the installation.

? Do you want to continue (Y/n) Y
ℹ Getting 1 pkg with unknown size
✔ Cached copy of tune 1.2.1.9000 (source) is the latest build
✔ No downloads needed, all packages are cached           
Error:        
! error in pak subprocess
Caused by error in `select_next_task(state)`:
! Cannot select new package installation task.
ℹ 1 package still waiting to install: tune.
ℹ This is an internal error in pkgdepends, please report an issue at
  <https://github.com/r-lib/pkgdepends/issues>.
Type .Last.error to see the more details.

sessioninfo():

> sessionInfo()
R version 4.4.1 (2024-06-14)
Platform: aarch64-apple-darwin20
Running under: macOS Ventura 13.6.7

Matrix products: default
BLAS:   /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib 
LAPACK: /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/lib/libRlapack.dylib;  LAPACK version 3.12.0

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

time zone: Europe/London
tzcode source: internal

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] taylor_3.1.0         probably_1.0.3.9001  yardstick_1.3.1      workflowsets_1.1.0  
 [5] workflows_1.1.4.9000 tune_1.2.1           tidyr_1.3.1          tibble_3.2.1        
 [9] rsample_1.2.1.9000   recipes_1.1.0        purrr_1.0.2          parsnip_1.2.1.9003  
[13] modeldata_1.4.0      infer_1.0.7          ggplot2_3.5.1        dplyr_1.1.4         
[17] dials_1.3.0          scales_1.3.0         broom_1.0.6          tidymodels_1.2.0    

loaded via a namespace (and not attached):
 [1] gtable_0.3.5        processx_3.8.4      lattice_0.22-6      callr_3.7.6         ps_1.7.7           
 [6] vctrs_0.6.5         tools_4.4.1         pak_0.8.0           generics_0.1.3      parallel_4.4.1     
[11] fansi_1.0.6         pkgconfig_2.0.3     Matrix_1.7-0        data.table_1.16.0   lhs_1.2.0          
[16] GPfit_1.0-8         lifecycle_1.0.4     compiler_4.4.1      munsell_0.5.1       codetools_0.2-20   
[21] DiceDesign_1.10     class_7.3-22        prodlim_2024.06.25  pillar_1.9.0        furrr_0.3.1        
[26] MASS_7.3-60.2       gower_1.0.1         iterators_1.0.14    foreach_1.5.2       rpart_4.1.23       
[31] parallelly_1.38.0   lava_1.8.0          tidyselect_1.2.1    digest_0.6.37       future_1.34.0      
[36] listenv_0.9.1       splines_4.4.1       grid_4.4.1          colorspace_2.1-1    cli_3.6.3          
[41] magrittr_2.0.3      survival_3.6-4      utf8_1.2.4          future.apply_1.11.2 withr_3.0.1        
[46] backports_1.5.0     lubridate_1.9.3     timechange_0.3.0    globals_0.16.3      nnet_7.3-19        
[51] timeDate_4032.109   gridExtra_2.3       hardhat_1.4.0.9002  rlang_1.1.4         Rcpp_1.0.13        
[56] glue_1.8.0          ipred_0.9-15        rstudioapi_0.16.0   R6_2.5.1     

pak::pak_sitrep()
* pak version:
- 0.8.0
* Version information:
- pak platform: aarch64-apple-darwin20 (current: aarch64-apple-darwin20, compatible)
- pak repository: - (local install?)
* Optional packages installed:
- pillar
* Library path:
- /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library
* pak is installed at /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/pak.
* Dependency versions:
- callr      3.7.6     
- cli        3.6.2     
- curl       5.2.1     
- desc       1.4.3     
- filelock   1.0.3     
- jsonlite   1.8.8     
- lpSolve    5.6.20    
- pkgbuild   1.4.4     
- pkgcache   2.2.2.9000
- pkgdepends 0.7.2.9000
- pkgsearch  3.1.3     
- processx   3.8.4     
- ps         1.7.6     
- R6         2.5.1     
- zip        2.3.1     
* Dependencies can be loaded

Thanks

[gaborcsardi]

Yeah, so there is a circular dependency here, so these packages cannot be installed. This is something to fix in tune or probably or tailor, I would think in tailor, since that's the new package:

❯ pak::pkg_deps_explain("tidymodels/tune", c("tune", "workflows", "rsample", "tailor"))
tune -> tailor -> probably -> workflows
tune -> workflows

tune -> rsample

tune -> tailor

x tune

❯ pak::pkg_deps_explain("tidymodels/tailor", c("tune", "workflows", "rsample", "tailor"))
tailor -> probably -> tune

tailor -> probably -> tune -> workflows
tailor -> probably -> workflows

tailor -> probably -> tune -> rsample

x tailor