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Fails to find version when JAVA_TOOL_OPTIONS is set #138

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nh13 opened this issue Jul 20, 2022 · 0 comments

nh13 commented Jul 20, 2022 •

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For example, if we set the JAVA_TOOL_OPTIONS environment variable

export JAVA_TOOL_OPTIONS=-Dfile.encoding=UTF8

then the first line is not the version:

$ java -version                                
Picked up JAVA_TOOL_OPTIONS: -Dfile.encoding=UTF8
openjdk version "1.8.0_322"
OpenJDK Runtime Environment (Zulu 8.60.0.21-CA-macos-aarch64) (build 1.8.0_322-b06)
OpenJDK 64-Bit Server VM (Zulu 8.60.0.21-CA-macos-aarch64) (build 25.322-b06, mixed mode)

The getActualJavaVersion looks only at the first line (see here).

Ideally, it would skip over leading lines that start with Picked up. Related to nextflow-io/nextflow#1716

The text was updated successfully, but these errors were encountered:

nh13 mentioned this issue

Nextflow executions fail with message 'Picked up JAVA_TOOL_OPTIONS' nextflow-io/nextflow#1716

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