From 1a52e6855bf0c42d7369391626aa6129b5396097 Mon Sep 17 00:00:00 2001 From: AndreaGuarracino Date: Sat, 17 Jun 2023 22:54:00 +0200 Subject: [PATCH] bioconda is still broken --- README.md | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index a1b609d..3c8e6bc 100644 --- a/README.md +++ b/README.md @@ -3,7 +3,8 @@ # pggb: the PanGenome Graph Builder ![Publish container to github container registry](https://github.com/pangenome/pggb/workflows/Publish%20container%20to%20github%20container%20registry/badge.svg) -[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](https://anaconda.org/bioconda/pggb) + +[//]: # ([![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](https://anaconda.org/bioconda/pggb)) `pggb` builds [pangenome](https://doi.org/10.1146%2Fannurev-genom-120219-080406) [variation graphs](https://doi.org/10.1038/nbt.4227) from a set of input sequences. @@ -312,7 +313,7 @@ singularity run -B ${PWD}/data:/data ../pggb_latest.sif pggb -i /data/HLA/DRB1-3 A script that handles the whole building process automatically can be found at https://github.com/nf-core/pangenome#building-a-native-container. -### Bioconda +### Bioconda (NO, IT IS CURRENTLY BROKEN, SEE [THIS ISSUE](https://github.com/pangenome/pggb/issues/294)) `pggb` recipes for Bioconda are available at https://anaconda.org/bioconda/pggb. To install the latest version using `Conda` execute: