2.0.11

Release Notes

Patch release in the 2.0.x series. Re-enables single EPI fieldmap processing.

Changes

• FIX: Create one fieldmap estimator per EPI-IntendedFor pair (#258)
• DOCKER: Build with FSL 6 (#254)

2.0.10

Release Notes

Patch release in the 2.0.x series.

Changes

• FIX: Update boilerplate ordering directives (#229)
• FIX: ishandling of topup coefficients with higher resolution EPIs (#251)

2.0.9

Release Notes

A patch release improving documentation and implementing B0Field* BIDS metadata.

Changes

• DOC: Bring implementation details to the foreground of documentation (#248)
• FIX: Implement B0FieldIdentifier / B0FieldSource (#247)

2.0.8

Release Notes

A patch release with a deep revision of the new implementation of the fieldmap-less "SDC-SyN" toward integration with fMRIPrep.

CHANGES

• FIX: SDC-SyN ("fieldmap-less") overhaul (#239)
• DOC: Self-hosted & multiversion documentation overhaul (#243)
• MAINT: Standardization of containers across NiPreps (#240)

Full Changelog: 2.0.7...2.0.8

Maintainers

@oesteban

2.0.7

Release Notes

A patch release with important bugfixes discovered during the integration with fMRIPrep.

CHANGES

• FIX: Generation of RAS displacements fields from VSMs (#237)
• FIX: Use subject root to resolve IntendedFor paths (#228)
• ENH: Improve support of 4D in sdcflows.interfaces.bspline.ApplyCoeffsField (#234)
• MAINT: Update node and gh-pages, push docs without history (#230)

Maintainers

@oesteban, @mgxd, @effigies.

2.0.6

Release Notes

A patch release to address a problem with TOPUP and an odd number of slices.

Changes

• ENH: Add slice padding to TOPUP (#217)

2.0.5

Release Notes

A bugfix release, adding the fieldwarp as an output to the unwarping workflow.

Changes

• FIX: The calculated displacements field not exposed by unwarp workflow (#224)
• MAINT: Use keys.openpgp.org over sks-keyservers (#223)

2.0.4

Release Notes

A hotfix release including some enhancements that should have been released within
the previous 2.0.3 release.

CHANGES

• ENH: Fine-tune the registration parameters in coeff2epi workflow (#215)
• ENH: Finalize upstreaming to NiWorkflows of IntensityClip (#216)
• ENH: Use new RobustAverage interface to merge corrected blips (#214)
• DOC: Insert copyright notice in header comments as per Apache-2.0 (#212)

2.0.3

Release Notes

A patch release including some improvements to the PEPOLAR/TOPUP implementation,
along with corresponding updates to the CI tests.

CHANGES

• ENH: Uniformize the grid&affine across EPI "blips" before TOPUP (#197)
• MAINT: Fix PEPOLAR workflow test with HCP data (#210)
• MAINT: Update tests after changes in ds001771's structure (#209)

2.0.2.post1

A patch release including hot-fixes and some relevant improvements inteded for the reliability
of the new API.
The most relevant advance is the new :math:`B_0` fieldmap unwarping object which is compatible
with *NiTranforms* and evades the problem of fiddling with the target image's x-forms.

* FIX: Make sure the VSM is not modified when accessing it (#207)
* FIX: Normalize phase-encoding polarity of coefficients after TOPUP (#202)
* FIX: Revise generation of the displacements field from coefficients (#199)
* FIX: Inconsistency left after renaming inputs to SDC-SyN (removing "BOLD") (#182)
* FIX: Correctly interpolate the BIDS root when datasets have sessions (#180)
* ENH: :math:`B_0` fieldmap unwarping object (#204)
* ENH: Add estimation method description to outputs (#191)
* ENH: Ensure a function node is covered with unit tests (#188)
* ENH: Add a preprocessing pipeline for SDC-SyN (#184)
* ENH: [rodents] Add input to override default B-Spline distances in INU correction with N4 (#178)
* ENH: Adopt new brain extraction algorithm in magnitude preparation workflow (#176)
* DOC: Fix typos as per codespell (#205)
* MAINT: Double-check conversion from TOPUP to standardized fieldmaps (#200)
* MAINT: Divide ambiguous debug parameter into smaller, more focused parameters (#190)
* MAINT: Adapt to GitHub actions' upgrade to Ubuntu 20.04 (#185)