From 0824ce24f07e46e4ef849aec67b1adcf7ddbc6cd Mon Sep 17 00:00:00 2001
From: Dominik Brilhaus <brilhaus@nfdi4plants.org>
Date: Thu, 19 Sep 2024 16:58:36 +0200
Subject: [PATCH 1/8] typos footer

---
 src/components/Footer.astro | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/components/Footer.astro b/src/components/Footer.astro
index b5f49b5..32fdc97 100644
--- a/src/components/Footer.astro
+++ b/src/components/Footer.astro
@@ -4,8 +4,8 @@ import { URLS } from "../statics";
 
 <footer class="footer bg-neutral text-neutral-content p-10 dark:bg-black dark:border-t-primary dark:border-t-2">
   <nav>
-    <h6 class="footer-title">Ressources</h6>
-    <a class="link link-hover" href={URLS.GITHUB_REPO}>Github</a>
+    <h6 class="footer-title">Resources</h6>
+    <a class="link link-hover" href={URLS.GITHUB_REPO}>GitHub</a>
     <a class="link link-hover" href={URLS.DATAPLANT_WEBSITE}>DataPLANT</a>
     <!-- <a class="link link-hover">Partners</a> -->
     <!-- <a class="link link-hover">Advertisement</a> -->

From 50cdd2f8d727725b5d5481769ad19032e0351c96 Mon Sep 17 00:00:00 2001
From: Dominik Brilhaus <brilhaus@nfdi4plants.org>
Date: Thu, 19 Sep 2024 17:15:39 +0200
Subject: [PATCH 2/8] add swate playlist, some edits

---
 src/pages/details/resources.mdx | 12 +++++++-----
 1 file changed, 7 insertions(+), 5 deletions(-)

diff --git a/src/pages/details/resources.mdx b/src/pages/details/resources.mdx
index a1f6213..6fb8808 100644
--- a/src/pages/details/resources.mdx
+++ b/src/pages/details/resources.mdx
@@ -12,16 +12,16 @@ tags: ["tools", "services", "community"]
 
 import Publication from '../../components/Publication.astro';
 
-**_ARC related resources from the community for the community._**
+**_ARC-related resources – from the community for the community._**
 
 Benefit from the accumulated knowledge of data stewards, developers, and researchers who have contributed to the ARC ecosystem.
 This page aggregates a selection of resources such as educational videos, publications, wikis, and more that have been shared by the ARC community.
 
 ## Articles and Wikis
 
-### DataPLANT knowledgebase
+### DataPLANT Knowledge Base
 
-The [DataPLANT knowledgebase](https://knowledgebase.nfdi4plants.org/) explains fundamental topics on RDM and how these aspects are implemented by the consortium to support plant researchers with RDM tools and services.
+The [DataPLANT Knowledge Base](https://knowledgebase.nfdi4plants.org/) explains fundamental topics on RDM and how these aspects are implemented by the consortium to support plant researchers with RDM tools and services.
 
 Some highlighted articles:
 
@@ -36,8 +36,10 @@ Some highlighted articles:
 DataPLANT has a [youtube channel](https://www.youtube.com/@nfdi4plants816) with educational videos on ARCs, quickstarts for tooling, and educational talks.
 
 Here are some highlights:
-- [ARCitect Quickstart playlist](https://www.youtube.com/watch?v=cC6uZkH51l4&list=PLi6d1LSow4XBZ4MKMMGOW6qDTZwe7Zg8w)
-- [CEPLAS + ARCs playlist](https://www.youtube.com/watch?v=Ay9e3mkT8R0)
+
+- [ARCitect Quickstart playlist](https://youtube.com/playlist?list=PLi6d1LSow4XBZ4MKMMGOW6qDTZwe7Zg8w&feature=shared)
+- [Swate Quickstart playlist](https://youtube.com/playlist?list=PLi6d1LSow4XCKLSHw1bZQK626L723UVd8&feature=shared)
+- [CEPLAS intro to ARCs playlist](https://www.youtube.com/watch?v=Ay9e3mkT8R0)
 
 ## Publications
 

From 2398ba4b15552a2c15c6f729089ad877ac32bb6e Mon Sep 17 00:00:00 2001
From: Dominik Brilhaus <brilhaus@nfdi4plants.org>
Date: Thu, 19 Sep 2024 17:19:20 +0200
Subject: [PATCH 3/8] unify capitalized ARC

---
 src/pages/details/tools-and-services/avpr.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/pages/details/tools-and-services/avpr.md b/src/pages/details/tools-and-services/avpr.md
index 1c58951..9a7eb59 100644
--- a/src/pages/details/tools-and-services/avpr.md
+++ b/src/pages/details/tools-and-services/avpr.md
@@ -1,6 +1,6 @@
 ---
 layout: ../../../layouts/MarkdownLayout.astro
-title: Arc Validation Package Registry (AVPR)
+title: ARC Validation Package Registry (AVPR)
 slug: avpr
 category: Services
 position: 4

From d69787bc4e2335646c34a288753906a051731ff1 Mon Sep 17 00:00:00 2001
From: Dominik Brilhaus <brilhaus@nfdi4plants.org>
Date: Thu, 19 Sep 2024 17:25:16 +0200
Subject: [PATCH 4/8] change order and add datahub to ARCitect description

---
 src/pages/details/tools-and-services/ARCitect.md | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/src/pages/details/tools-and-services/ARCitect.md b/src/pages/details/tools-and-services/ARCitect.md
index 2f46546..98d025f 100644
--- a/src/pages/details/tools-and-services/ARCitect.md
+++ b/src/pages/details/tools-and-services/ARCitect.md
@@ -13,7 +13,8 @@ readMore:
 ---
 
 **An end-to-end GUI application to manage ARCs.** The ARCitect bundles many of the individual tools from DataPLANT into a single GUI application.
+Create and edit your ARCs.
+Synchronize ARCs with the [PLANTdataHUB](#PLANTdataHUB).
 Use [Swate](#Swate) to enrich Assays and Studies with metadata from ontologies.
 Edit any metadata directly.
-Select validation packages to use in ARC Data Hub CQC pipelines.
-Commit and sync changes to any remote repository.
\ No newline at end of file
+Select validation packages to use in ARC Data Hub CQC pipelines.
\ No newline at end of file

From 3a68e5e20b896c1a939cb30a714c11d80de754cf Mon Sep 17 00:00:00 2001
From: Dominik Brilhaus <brilhaus@nfdi4plants.org>
Date: Thu, 19 Sep 2024 17:46:33 +0200
Subject: [PATCH 5/8] add doi to dictionary

---
 src/pages/dictionary/doi.md | 12 ++++++++++++
 1 file changed, 12 insertions(+)
 create mode 100644 src/pages/dictionary/doi.md

diff --git a/src/pages/dictionary/doi.md b/src/pages/dictionary/doi.md
new file mode 100644
index 0000000..e656e8a
--- /dev/null
+++ b/src/pages/dictionary/doi.md
@@ -0,0 +1,12 @@
+---
+layout: ../../layouts/MarkdownLayout.astro
+title: 'DOI'
+pubDate: 2024-09-19
+description: 'Digital Object Identifier'
+author: Dominik Brilhaus
+tags: ["PID"]
+keywords: ['DOI']
+url: 'doi'
+---
+
+For more information about DOIs see https://www.doi.org
\ No newline at end of file

From fe8d71569642265b2f6dc9289a9fb6ec262c43e9 Mon Sep 17 00:00:00 2001
From: Dominik Brilhaus <brilhaus@nfdi4plants.org>
Date: Thu, 19 Sep 2024 17:49:07 +0200
Subject: [PATCH 6/8] unify PLANTdataHUB

---
 src/pages/details/tools-and-services/arc-validate.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/src/pages/details/tools-and-services/arc-validate.md b/src/pages/details/tools-and-services/arc-validate.md
index d86ce54..daa54dd 100644
--- a/src/pages/details/tools-and-services/arc-validate.md
+++ b/src/pages/details/tools-and-services/arc-validate.md
@@ -13,4 +13,4 @@ readMore:
 ---
 
 A CLI-based tool to **install, manage, and execute ARC validation packages**.
-arc-validate is used to run ARC validation in CQC pipelines at [PLANTDataHUB]({{DATAPLANT_ARC_HUB}}).
\ No newline at end of file
+arc-validate is used to run ARC validation in CQC pipelines at [PLANTdataHUB]({{DATAPLANT_ARC_HUB}}).
\ No newline at end of file

From afdd4398ea0ab9b9ab2470994d13f130694a2e2b Mon Sep 17 00:00:00 2001
From: Dominik Brilhaus <brilhaus@nfdi4plants.org>
Date: Thu, 19 Sep 2024 17:54:33 +0200
Subject: [PATCH 7/8] add link to swate alpha

---
 src/pages/details/tools-and-services/SWATE.md | 2 +-
 src/statics.ts                                | 4 +++-
 2 files changed, 4 insertions(+), 2 deletions(-)

diff --git a/src/pages/details/tools-and-services/SWATE.md b/src/pages/details/tools-and-services/SWATE.md
index f70441b..5e83565 100644
--- a/src/pages/details/tools-and-services/SWATE.md
+++ b/src/pages/details/tools-and-services/SWATE.md
@@ -15,4 +15,4 @@ readMore:
 
 Swate is a tool for **ontology-driven metadata annotation**.
 It provides a familiar, spreadsheet-like work environment that makes it easy to incrementally increase metadata quality of an [ARC Scaffold]({{INTERNAL_DEV_REPRESENTATION_ARC_SCAFFOLD}}).
-Swate is integrated into the [ARCitect](#ARCitect), but can also be used as a standalone-web based tool.
+Swate is integrated into the [ARCitect](#ARCitect), but can also be used as a [standalone-web based tool]({{DATAPLANT_SWATE_ALPHA}}).
diff --git a/src/statics.ts b/src/statics.ts
index 4ab4bfd..ca34d58 100644
--- a/src/statics.ts
+++ b/src/statics.ts
@@ -28,6 +28,8 @@ export enum URLS {
   DATAPLANT_WEBSITE = "https://www.nfdi4plants.org",
   DATAPLANT_ARC_HUB = "https://git.nfdi4plants.org",
   DATAPLANT_KNOWLEDGEBASE = "https://knowledgebase.nfdi4plants.org",
-  S3_DATAHUB_STATS = "https://frct-dataplant-static.s3.bwsfs.uni-freiburg.de/stats.json"
+  S3_DATAHUB_STATS = "https://frct-dataplant-static.s3.bwsfs.uni-freiburg.de/stats.json",
+
+  DATAPLANT_SWATE_ALPHA = "https://swate-alpha.nfdi4plants.org",
 
 }
\ No newline at end of file

From 1d68ddab0ef3321cd6bbc94db45511b01a2114da Mon Sep 17 00:00:00 2001
From: Dominik Brilhaus <brilhaus@nfdi4plants.org>
Date: Thu, 19 Sep 2024 18:02:32 +0200
Subject: [PATCH 8/8] typos

---
 src/pages/details/versioning.md | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/src/pages/details/versioning.md b/src/pages/details/versioning.md
index d9bcfb5..1c8a90e 100644
--- a/src/pages/details/versioning.md
+++ b/src/pages/details/versioning.md
@@ -12,14 +12,14 @@ Applying the FAIR principles onto a dataset requires ticking numerous different
 
 ## Immutable yet evolving
 
-In reality, research is a continuous process both preceeding and succeeding the publication, i.e. an evolving sequence of snapshots, including intermediate or negative results. Therefore, a method is needed to allow applying the FAIR principles incrementally, accompanying the whole research cycle. For this, ARCs inherit a well established concept from Software Development for making the process of collection, annotation, and analysis of data more dynamic, namely versioning. For this, all ARCs are also Git repositories.
+In reality, research is a continuous process both preceding and succeeding the publication, i.e. an evolving sequence of snapshots, including intermediate or negative results. Therefore, a method is needed to allow applying the FAIR principles incrementally, accompanying the whole research cycle. For this, ARCs inherit a well established concept from Software Development for making the process of collection, annotation, and analysis of data more dynamic, namely versioning. For this, all ARCs are also Git repositories.
 
 ![Git Fairification](/arc-website/git-fairification.png)
 
 Using Git allows for the ARC to grow together with the experiment, possibly even across multiple publications. Besides this, ARCs can be shared across any Git-based platform. With Git being this wide-spread, there exist numerous hosting solutions, both publicly available and on-premise.
 
-As research is becoming increasingly multi-disciplinary, collaboration is usually a given. This collaboration should also extend to the process of fostering the ARC, as most information about an area of research can be provided by the expert conducting it. Git has well-established capabilities and workflows to allow both parallel and sequential collaboration, ensuring sanity of information and provenance of the contributor.
+As research is becoming increasingly multi-disciplinary, collaboration is usually given. This collaboration should also extend to the process of fostering the ARC, as most information about an area of research can be provided by the expert conducting it. Git has well-established capabilities and workflows to allow both parallel and sequential collaboration, ensuring sanity of information and provenance of the contributor.
 
 ![Git Collaboration](/arc-website/git-collaboration.png)
 
-Data is an integral part of ARCs and Data size can vary vastly accross different scientific domains. In order to handle large files, which can be problematic, Git LFS is used in ARCs. By this extension, the standard Git operations can be used a usual, with additional LFS capabilities being available.
\ No newline at end of file
+Data is an integral part of ARCs and data size can vary vastly across different scientific domains. In order to handle large files, which can be challenging, Git LFS is used in ARCs. By this extension, the standard Git operations can be used as usual, with additional LFS capabilities being available.
\ No newline at end of file