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Replace CheckM with CheckM2 #607

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CarsonJM opened this issue Mar 22, 2024 · 5 comments
Open

Replace CheckM with CheckM2 #607

CarsonJM opened this issue Mar 22, 2024 · 5 comments
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@dialvarezs

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@CarsonJM
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No description provided.

@jfy133
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jfy133 commented May 10, 2024

Module exists: https://nf-co.re/modules/checkm2_predict

@jfy133 jfy133 mentioned this issue May 10, 2024
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@jfy133
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jfy133 commented Sep 19, 2024

As he's hinted to do the addition :D

nf-core/modules#6654 (comment)

@harper357
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is there any update on this?

@jfy133
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jfy133 commented Oct 16, 2024

Would need to ask @dialvarezs

@dialvarezs
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Sorry, I have been a little busy lately, so it's advanced but still half baked. I plan to send the PR in th next 10 to 15 days.

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nf-core/mag newcomer tasks
Status: Add Module To Pipeline
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@harper357 @dialvarezs @jfy133 @CarsonJM