diff --git a/data/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/CHANGELOG.md b/data/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/CHANGELOG.md index 1ba5f94a..7ee7b5c2 100644 --- a/data/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/CHANGELOG.md +++ b/data/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z Initial release for Nextclade v3! diff --git a/data/nextstrain/sars-cov-2/BA.2.86/CHANGELOG.md b/data/nextstrain/sars-cov-2/BA.2.86/CHANGELOG.md index e0771fef..d6d56dd2 100644 --- a/data/nextstrain/sars-cov-2/BA.2.86/CHANGELOG.md +++ b/data/nextstrain/sars-cov-2/BA.2.86/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data/nextstrain/sars-cov-2/BA.2/CHANGELOG.md b/data/nextstrain/sars-cov-2/BA.2/CHANGELOG.md index 19bb552a..a84bb2b4 100644 --- a/data/nextstrain/sars-cov-2/BA.2/CHANGELOG.md +++ b/data/nextstrain/sars-cov-2/BA.2/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data/nextstrain/sars-cov-2/XBB/CHANGELOG.md b/data/nextstrain/sars-cov-2/XBB/CHANGELOG.md index e0771fef..d6d56dd2 100644 --- a/data/nextstrain/sars-cov-2/XBB/CHANGELOG.md +++ b/data/nextstrain/sars-cov-2/XBB/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data/nextstrain/sars-cov-2/wuhan-hu-1/orfs/CHANGELOG.md b/data/nextstrain/sars-cov-2/wuhan-hu-1/orfs/CHANGELOG.md index ccb58add..c1bf2738 100644 --- a/data/nextstrain/sars-cov-2/wuhan-hu-1/orfs/CHANGELOG.md +++ b/data/nextstrain/sars-cov-2/wuhan-hu-1/orfs/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data/nextstrain/sars-cov-2/wuhan-hu-1/proteins/CHANGELOG.md b/data/nextstrain/sars-cov-2/wuhan-hu-1/proteins/CHANGELOG.md index 217801c3..da5d952f 100644 --- a/data/nextstrain/sars-cov-2/wuhan-hu-1/proteins/CHANGELOG.md +++ b/data/nextstrain/sars-cov-2/wuhan-hu-1/proteins/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/CHANGELOG.md b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/CHANGELOG.md similarity index 90% rename from data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/CHANGELOG.md rename to data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/CHANGELOG.md index 1ba5f94a..7ee7b5c2 100644 --- a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/CHANGELOG.md +++ b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z Initial release for Nextclade v3! diff --git a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/README.md b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/README.md similarity index 100% rename from data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/README.md rename to data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/README.md diff --git a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/dataset.zip b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/dataset.zip similarity index 99% rename from data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/dataset.zip rename to data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/dataset.zip index 2578ee0c..20464e82 100644 Binary files a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/dataset.zip and b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/dataset.zip differ diff --git a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/genome_annotation.gff3 b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/genome_annotation.gff3 similarity index 100% rename from data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/genome_annotation.gff3 rename to data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/genome_annotation.gff3 diff --git a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/pathogen.json b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/pathogen.json similarity index 95% rename from data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/pathogen.json rename to data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/pathogen.json index 2247c73c..7631e156 100644 --- a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/pathogen.json +++ b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/pathogen.json @@ -57,7 +57,8 @@ }, "schemaVersion": "3.0.0", "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/reference.fasta b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/reference.fasta similarity index 100% rename from data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/reference.fasta rename to data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/reference.fasta diff --git a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/sequences.fasta b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/sequences.fasta similarity index 100% rename from data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/sequences.fasta rename to data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/sequences.fasta diff --git a/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/tree.json b/data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/tree.json similarity index 100% rename from data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/unreleased/tree.json rename to data_output/community/isuvdl/mazeller/prrsv2/orf5/yimim2023/2024-02-16--04-00-32Z/tree.json diff --git a/data_output/index.json b/data_output/index.json index dbf3ab6b..ef002872 100644 --- a/data_output/index.json +++ b/data_output/index.json @@ -85,7 +85,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -101,7 +102,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -164,7 +166,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -180,7 +183,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -246,7 +250,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -262,7 +267,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -325,7 +331,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -341,7 +348,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -404,7 +412,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -420,7 +429,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -2212,7 +2222,8 @@ }, "versions": [ { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -2220,7 +2231,8 @@ } ], "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/sars-cov-2/XBB/unreleased/CHANGELOG.md b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/sars-cov-2/XBB/unreleased/CHANGELOG.md rename to data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/CHANGELOG.md index e0771fef..d6d56dd2 100644 --- a/data_output/nextstrain/sars-cov-2/XBB/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/README.md b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/README.md similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/README.md rename to data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/README.md diff --git a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/dataset.zip b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/dataset.zip similarity index 99% rename from data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/dataset.zip rename to data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/dataset.zip index dcf3dc77..09825077 100644 Binary files a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/dataset.zip and b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/dataset.zip differ diff --git a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/genome_annotation.gff3 b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/pathogen.json b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/pathogen.json similarity index 99% rename from data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/pathogen.json rename to data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/pathogen.json index c3362bdc..eaf48634 100644 --- a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/pathogen.json +++ b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/pathogen.json @@ -2690,7 +2690,8 @@ }, "schemaVersion": "3.0.0", "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/reference.fasta b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/reference.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/reference.fasta rename to data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/reference.fasta diff --git a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/sequences.fasta b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/sequences.fasta rename to data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/sequences.fasta diff --git a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/tree.json b/data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/tree.json similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/tree.json rename to data_output/nextstrain/sars-cov-2/BA.2.86/2024-02-16--04-00-32Z/tree.json diff --git a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/CHANGELOG.md b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/sars-cov-2/BA.2/unreleased/CHANGELOG.md rename to data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/CHANGELOG.md index 19bb552a..a84bb2b4 100644 --- a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/README.md b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/README.md similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2/unreleased/README.md rename to data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/README.md diff --git a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/dataset.zip b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/dataset.zip similarity index 99% rename from data_output/nextstrain/sars-cov-2/BA.2/unreleased/dataset.zip rename to data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/dataset.zip index 50a05b64..861366c4 100644 Binary files a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/dataset.zip and b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/dataset.zip differ diff --git a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/genome_annotation.gff3 b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/pathogen.json b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/pathogen.json similarity index 99% rename from data_output/nextstrain/sars-cov-2/BA.2/unreleased/pathogen.json rename to data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/pathogen.json index 57cb4a4f..99d9b880 100644 --- a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/pathogen.json +++ b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/pathogen.json @@ -2690,7 +2690,8 @@ }, "schemaVersion": "3.0.0", "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/reference.fasta b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/reference.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2/unreleased/reference.fasta rename to data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/reference.fasta diff --git a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/sequences.fasta b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2/unreleased/sequences.fasta rename to data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/sequences.fasta diff --git a/data_output/nextstrain/sars-cov-2/BA.2/unreleased/tree.json b/data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/tree.json similarity index 100% rename from data_output/nextstrain/sars-cov-2/BA.2/unreleased/tree.json rename to data_output/nextstrain/sars-cov-2/BA.2/2024-02-16--04-00-32Z/tree.json diff --git a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/CHANGELOG.md b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/CHANGELOG.md rename to data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/CHANGELOG.md index e0771fef..d6d56dd2 100644 --- a/data_output/nextstrain/sars-cov-2/BA.2.86/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data_output/nextstrain/sars-cov-2/XBB/unreleased/README.md b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/README.md similarity index 100% rename from data_output/nextstrain/sars-cov-2/XBB/unreleased/README.md rename to data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/README.md diff --git a/data_output/nextstrain/sars-cov-2/XBB/unreleased/dataset.zip b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/dataset.zip similarity index 99% rename from data_output/nextstrain/sars-cov-2/XBB/unreleased/dataset.zip rename to data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/dataset.zip index c902a77e..ba8cdfc5 100644 Binary files a/data_output/nextstrain/sars-cov-2/XBB/unreleased/dataset.zip and b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/dataset.zip differ diff --git a/data_output/nextstrain/sars-cov-2/XBB/unreleased/genome_annotation.gff3 b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/sars-cov-2/XBB/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/sars-cov-2/XBB/unreleased/pathogen.json b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/pathogen.json similarity index 99% rename from data_output/nextstrain/sars-cov-2/XBB/unreleased/pathogen.json rename to data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/pathogen.json index 24f9a790..0641f3a4 100644 --- a/data_output/nextstrain/sars-cov-2/XBB/unreleased/pathogen.json +++ b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/pathogen.json @@ -2690,7 +2690,8 @@ }, "schemaVersion": "3.0.0", "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/sars-cov-2/XBB/unreleased/reference.fasta b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/reference.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/XBB/unreleased/reference.fasta rename to data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/reference.fasta diff --git a/data_output/nextstrain/sars-cov-2/XBB/unreleased/sequences.fasta b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/XBB/unreleased/sequences.fasta rename to data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/sequences.fasta diff --git a/data_output/nextstrain/sars-cov-2/XBB/unreleased/tree.json b/data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/tree.json similarity index 100% rename from data_output/nextstrain/sars-cov-2/XBB/unreleased/tree.json rename to data_output/nextstrain/sars-cov-2/XBB/2024-02-16--04-00-32Z/tree.json diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/CHANGELOG.md b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/CHANGELOG.md rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/CHANGELOG.md index ccb58add..c1bf2738 100644 --- a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/README.md b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/README.md similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/README.md rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/README.md diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/dataset.zip b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/dataset.zip similarity index 99% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/dataset.zip rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/dataset.zip index 7b33746f..0d39500a 100644 Binary files a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/dataset.zip and b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/dataset.zip differ diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/genome_annotation.gff3 b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/pathogen.json b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/pathogen.json similarity index 99% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/pathogen.json rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/pathogen.json index d0f62f7b..9bbcf158 100644 --- a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/pathogen.json +++ b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/pathogen.json @@ -2690,7 +2690,8 @@ }, "schemaVersion": "3.0.0", "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/reference.fasta b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/reference.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/reference.fasta rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/reference.fasta diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/sequences.fasta b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/sequences.fasta rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/sequences.fasta diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/tree.json b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/tree.json similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/unreleased/tree.json rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/orfs/2024-02-16--04-00-32Z/tree.json diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/CHANGELOG.md b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/CHANGELOG.md similarity index 98% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/CHANGELOG.md rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/CHANGELOG.md index 217801c3..da5d952f 100644 --- a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/CHANGELOG.md +++ b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/CHANGELOG.md @@ -1,4 +1,4 @@ -## Unreleased +## 2024-02-16T04:00:32Z - All 35 Pango lineages designated between 2024-01-16 and 2024-02-12 are now included, unfold below to see a list of all newly included lineages with their designation dates: diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/README.md b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/README.md similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/README.md rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/README.md diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/dataset.zip b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/dataset.zip similarity index 99% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/dataset.zip rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/dataset.zip index d3052cf9..c6f54676 100644 Binary files a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/dataset.zip and b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/dataset.zip differ diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/genome_annotation.gff3 b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/genome_annotation.gff3 similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/genome_annotation.gff3 rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/genome_annotation.gff3 diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/pathogen.json b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/pathogen.json similarity index 99% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/pathogen.json rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/pathogen.json index c6a63644..61ead6b1 100644 --- a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/pathogen.json +++ b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/pathogen.json @@ -2690,7 +2690,8 @@ }, "schemaVersion": "3.0.0", "version": { - "tag": "unreleased", + "updatedAt": "2024-02-16T04:00:32Z", + "tag": "2024-02-16--04-00-32Z", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/reference.fasta b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/reference.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/reference.fasta rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/reference.fasta diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/sequences.fasta b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/sequences.fasta similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/sequences.fasta rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/sequences.fasta diff --git a/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/tree.json b/data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/tree.json similarity index 100% rename from data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/unreleased/tree.json rename to data_output/nextstrain/sars-cov-2/wuhan-hu-1/proteins/2024-02-16--04-00-32Z/tree.json