From 3647979ea8f01e81e9619cdb70fd5febbacee984 Mon Sep 17 00:00:00 2001 From: Joe Flack Date: Tue, 30 Jan 2024 19:29:09 -0500 Subject: [PATCH] Delete: Goal for mondo.sssom.config.yml It was previously getting from the 'mondo' repository, but the use cases / contents of the mondo-ingest config is significantly different, so it is now simply created statically. --- src/ontology/mondo-ingest.Makefile | 5 ----- 1 file changed, 5 deletions(-) diff --git a/src/ontology/mondo-ingest.Makefile b/src/ontology/mondo-ingest.Makefile index fe2db414..5d72003e 100644 --- a/src/ontology/mondo-ingest.Makefile +++ b/src/ontology/mondo-ingest.Makefile @@ -196,11 +196,6 @@ $(TMPDIR)/component-%.json: $(COMPONENTSDIR)/%.owl $(ROBOT) convert -i $< -f json -o $@ .PRECIOUS: $(TMPDIR)/component-%.json -MONDO_SSSOM_CONFIG_URL=https://raw.githubusercontent.com/monarch-initiative/mondo/master/src/ontology/metadata/mondo.sssom.config.yml - -metadata/mondo.sssom.config.yml: - wget $(MONDO_SSSOM_CONFIG_URL) -O $@ - $(MAPPINGSDIR)/%.sssom.tsv: $(TMPDIR)/component-%.json metadata/mondo.sssom.config.yml sssom parse $< -I obographs-json --prefix-map-mode merged -m metadata/mondo.sssom.config.yml -o $@ sssom sort $@ -o $@