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.travis.yml
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.travis.yml
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language: r
cache: packages
# language: c
# To build on OSX, switch the previous line to
# language: objective-c
sudo: required
script:
- Rscript -e 'install.packages(c("MCMCpack","mvtnorm"))'
- Rscript -e "require(knitr); fname = 'Exercise_01_RPrimer.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_02_Distributions.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_03_Fire_MLE.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_04.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_05_JAGS.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_06_Growth.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_07_CI.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_09_GLM.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_10_HB.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_11_StateSpace.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_13_TimeSeries.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_14_Spatial_Models.Rmd'; knit(fname); purl(fname)"
- Rscript -e "require(knitr); fname = 'Exercise_15_CAR.Rmd'; knit(fname); purl(fname)"
install:
#before_install:
# - curl -OL http://raw.github.com/craigcitro/r-travis/master/scripts/travis-tool.sh
# - chmod 755 ./travis-tool.sh
# - ./travis-tool.sh bootstrap
- wget https://sourceforge.net/projects/mcmc-jags/files/JAGS/4.x/Source/JAGS-4.1.0.tar.gz
- tar -xvzf JAGS-4.1.0.tar.gz
- (cd JAGS-4.1.0; ./configure; make; sudo make install)
- Rscript -e "install.packages(c('coda','mvtnorm','rjags','knitr','maps','spatial'))"
#install:
# - ./travis-tool.sh install_deps
r_packages:
- rjags
- knitr
- mvtnorm
- maps
- spatial
- coda
env:
global:
- BOOTSTRAP_LATEX="1"