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ImportError while loading conftest '/home/runner/work/neuroconv/neuroconv/docs/conversion_examples_gallery/conftest.py'.
docs/conversion_examples_gallery/conftest.py:4: in <module>
from tests.test_on_data.setup_paths importECEPHY_DATA_PATH, BEHAVIOR_DATA_PATH, OPHYS_DATA_PATH, TEXT_DATA_PATH
tests/test_on_data/setup_paths.py:7: in <module>
from neuroconv.utils import load_dict_from_file
src/neuroconv/__init__.py:1: in <module>
from .basedatainterface import BaseDataInterface
src/neuroconv/basedatainterface.py:7: in <module>
from pynwb import NWBFile
/opt/hostedtoolcache/Python/3.9.17/x64/lib/python3.9/site-packages/pynwb/__init__.py:353: in <module>
from . import io as __io # noqa: F401,E402
/opt/hostedtoolcache/Python/3.9.17/x64/lib/python3.9/site-packages/pynwb/io/__init__.py:1: in <module>
from . import base as __base
/opt/hostedtoolcache/Python/3.9.17/x64/lib/python3.9/site-packages/pynwb/io/base.py:3: in <module>
from .core import NWBContainerMapper
/opt/hostedtoolcache/Python/3.9.17/x64/lib/python3.9/site-packages/pynwb/io/core.py:9: in <module>
from pynwb.file import NWBFile
/opt/hostedtoolcache/Python/3.9.17/x64/lib/python3.9/site-packages/pynwb/file.py:11: in <module>
from hdmf.container import ExternalResourcesManager
E ImportError: cannot import name 'ExternalResourcesManager' from 'hdmf.container' (/opt/hostedtoolcache/Python/3.9.17/x64/lib/python3.9/site-packages/hdmf/container.py)
@CodyCBakerPhD The fix should be out this week. We are merging some PRs into HDMF this week before doing a release. After the release, I will create a PR on pynwb to update the name change.
What happened?
Latest NeuroConv daily CI caught an HDMF import issue, wanted to make sure you're all aware of it
Steps to Reproduce
Traceback
Operating System
Windows
Python Executable
Conda
Python Version
3.8
Package Versions
No response
Code of Conduct
The text was updated successfully, but these errors were encountered: