diff --git a/util/fix-uris.pl b/util/fix-uris.pl new file mode 100755 index 000000000000..bd63797a52cb --- /dev/null +++ b/util/fix-uris.pl @@ -0,0 +1,19 @@ +#!/usr/bin/perl -np +# +# -- +# xenbase OK +# sgd OK +# pombase OK +# RNA cental not in identifiers.org - keep as http://rnacentral.org/rna/? +# uniprot uses identifiers.org - consider uniprot PURL +# TAIR: https://github.com/identifiers-org/registry/issues/5 +# -- +# OTHERS: +s@http://www.informatics.jax.org/accession/MGI:MGI:@http://identifiers.org/mgi/MGI:@g; +s@http://zfin.org/@http://identifiers.org/zfin/@g; +s@http://rgd.mcw.edu/rgdweb/report/gene/main.html?id=@http://identifiers.org/rgd/@g; +s@http://www.wormbase.org/db/gene/gene?name=@http://identifiers.org/wormbase/@g; +s@http://flybase.org/reports/@http://identifiers.org/flybase/@g; +s@http://dictybase.org/gene/@http://identifiers.org/dictybase.gene/@g; +# TODO +s@http://identifiers.org/TAIR:locus:@http://identifiers.org/tair.locus/@g;